FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027548 through 18771 annotations produced 2 hits

One Twenty Two (nito):

Annotation Number : CG2910
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027548
Gbrowse : chr2R:3849990-3854191 (+) // 99.87 //
Probeset : 1626940_at
Accessions : protein= NP_610339; /// NP_724633;, nucleotide= NM_136495; /// NM_165579;
Pathway : via spliceosome // inferred by curator /// 0045449 // regulation of transcription // inferred from electronic annotatio
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0071011 // precatalytic spliceosome // inferred from direc
FlyMine data for FBgn0027548.
BioGrid reports that CG2910 interacts with CG31121 CG33017 CG4394 CG5692 CG3342 CG4148 CG8854 CG8933 CG9448 .
VDRC has 2 RNAi stocks for FBgn0027548 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	183 ± 3	4 of 4	1.50	Up
Head	102 ± 9	4 of 4	0.80	None
Eye	100 ± 5	4 of 4	0.83	None
Thoracicoabdominal ganglion	152 ± 6	4 of 4	1.30	None
Salivary gland	145 ± 4	4 of 4	1.19	None
Crop	128 ± 3	4 of 4	1.10	None
Midgut	86 ± 9	4 of 4	0.70	Down
Tubule	246 ± 8	4 of 4	2.00	Up
Hindgut	118 ± 1	4 of 4	1.00	None
Heart	97 ± 4	4 of 4	0.80	None
Fat body	116 ± 15	4 of 4	0.96	None
Ovary	304 ± 4	4 of 4	2.50	Up
Testis	19 ± 1	4 of 4	0.20	Down
Male accessory glands	101 ± 11	4 of 4	0.80	None
Virgin spermatheca	269 ± 11	4 of 4	2.21	Up
Mated spermatheca	237 ± 4	4 of 4	1.95	Up
Adult carcass	89 ± 3	4 of 4	0.70	None
Larval CNS	609 ± 78	4 of 4	5.01	Up
Larval Salivary gland	156 ± 0	4 of 4	1.29	Up
Larval midgut	109 ± 5	4 of 4	0.90	None
Larval tubule	190 ± 8	4 of 4	1.60	Up
Larval hindgut	181 ± 7	4 of 4	1.50	Up
Larval fat body	98 ± 4	4 of 4	0.80	None
Larval trachea	213 ± 31	4 of 4	1.75	Up
Larval carcass	245 ± 10	4 of 4	2.02	Up
S2 cells (growing)	198 ± 6	4 of 4	1.64	Up
Whole fly	121 ± 10	4 of 4

One Twenty Two (nito):

Annotation Number : CG2910
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027548
Gbrowse : chr2R:3849990-3857320 (+) // 100.0 //
Probeset : 1635804_at
Accessions : protein= NP_610339; /// NP_724633;, nucleotide= NM_136495; /// NM_165579;
Pathway : via spliceosome // inferred by curator /// 0045449 // regulation of transcription // inferred from electronic annotatio
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0071011 // precatalytic spliceosome // inferred from direc
FlyMine data for FBgn0027548.
BioGrid reports that CG2910 interacts with CG31121 CG33017 CG4394 CG5692 CG3342 CG4148 CG8854 CG8933 CG9448 .
VDRC has 2 RNAi stocks for FBgn0027548 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	3 of 4	2.30	Up
Head	7 ± 1	0 of 4	1.60	None
Eye	12 ± 2	0 of 4	2.62	Up
Thoracicoabdominal ganglion	13 ± 2	0 of 4	2.60	Up
Salivary gland	24 ± 1	2 of 4	4.96	Up
Crop	16 ± 2	0 of 4	3.30	Up
Midgut	5 ± 2	0 of 4	1.10	None
Tubule	10 ± 0	0 of 4	2.20	Up
Hindgut	13 ± 0	1 of 4	2.70	Up
Heart	6 ± 1	1 of 4	1.40	None
Fat body	12 ± 6	0 of 4	2.57	None
Ovary	3 ± 0	0 of 4	0.70	None
Testis	6 ± 1	2 of 4	1.30	None
Male accessory glands	22 ± 2	2 of 4	4.60	Up
Virgin spermatheca	18 ± 1	1 of 4	3.70	Up
Mated spermatheca	19 ± 3	3 of 4	3.93	Up
Adult carcass	7 ± 2	0 of 4	1.60	None
Larval CNS	27 ± 4	4 of 4	5.56	Up
Larval Salivary gland	23 ± 4	0 of 4	4.70	Up
Larval midgut	4 ± 0	0 of 4	0.86	None
Larval tubule	14 ± 3	1 of 4	2.90	None
Larval hindgut	10 ± 2	0 of 4	2.08	None
Larval fat body	12 ± 3	1 of 4	2.60	None
Larval trachea	19 ± 2	4 of 4	3.89	Up
Larval carcass	12 ± 0	0 of 4	2.48	Up
S2 cells (growing)	13 ± 0	1 of 4	2.79	Up
Whole fly	4 ± 2	0 of 4

Looking for FBgn0027548. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720