FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027553 through 18771 annotations produced 1 hits

CG32721 (NELF-B):

Annotation Number : CG32721
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027553
Gbrowse : chrX:7620026-7622355 (-) // 100.0 //
Probeset : 1629337_at
Accessions : protein= NP_572402;, nucleotide= NM_132174;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred f
Interpro : 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003729 // mRNA binding // inferred from s
FlyMine data for FBgn0027553.
BDGP gene expression has embryonic in situ data for BcDNA:GH10333: 4 pix of staining in 1 body parts.
TRiP has 2 RNAi stocks for FBgn0027553 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027553 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	68 ± 2	4 of 4	0.80	None
Head	45 ± 2	4 of 4	0.60	Down
Eye	42 ± 1	4 of 4	0.52	Down
Thoracicoabdominal ganglion	73 ± 4	4 of 4	0.90	None
Salivary gland	71 ± 8	4 of 4	0.86	None
Crop	49 ± 2	4 of 4	0.60	None
Midgut	59 ± 3	2 of 4	0.70	None
Tubule	57 ± 0	4 of 4	0.70	Down
Hindgut	54 ± 1	4 of 4	0.70	None
Heart	38 ± 3	4 of 4	0.47	Down
Fat body	48 ± 2	4 of 4	0.59	None
Ovary	172 ± 7	4 of 4	2.10	Up
Testis	23 ± 1	4 of 4	0.30	Down
Male accessory glands	81 ± 4	4 of 4	1.00	None
Virgin spermatheca	43 ± 2	4 of 4	0.53	Down
Mated spermatheca	54 ± 5	4 of 4	0.67	None
Adult carcass	50 ± 4	4 of 4	0.60	None
Larval CNS	119 ± 9	4 of 4	1.45	Up
Larval Salivary gland	194 ± 3	4 of 4	2.37	Up
Larval midgut	61 ± 1	4 of 4	0.74	None
Larval tubule	49 ± 2	4 of 4	0.60	None
Larval hindgut	62 ± 1	4 of 4	0.76	None
Larval fat body	53 ± 6	4 of 4	0.60	None
Larval trachea	68 ± 5	4 of 4	0.84	None
Larval carcass	85 ± 7	4 of 4	1.04	None
S2 cells (growing)	118 ± 5	4 of 4	1.44	Up
Whole fly	82 ± 10	4 of 4

Looking for FBgn0027553. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720