FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027567 through 18771 annotations produced 1 hits

(CG8108):

Annotation Number : CG8108
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027567
Gbrowse : chr3L:9857705-9863784 (+) // 100.0 //
Probeset : 1631368_s_at
Accessions : protein= NP_648367; /// NP_729568;, nucleotide= NM_140110; /// NM_168386;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation
FlyMine data for FBgn0027567.
BioGrid reports that CG8108 interacts with CG9415 .
TRiP has 2 RNAi stocks for FBgn0027567 available for purchase.
VDRC has 2 RNAi stocks for FBgn0027567 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	665 ± 20	4 of 4	2.50	Up
Head	179 ± 8	4 of 4	0.70	Down
Eye	286 ± 7	4 of 4	1.08	None
Thoracicoabdominal ganglion	624 ± 15	4 of 4	2.40	Up
Salivary gland	146 ± 4	3 of 4	0.55	Down
Crop	158 ± 12	4 of 4	0.60	Down
Midgut	122 ± 3	4 of 4	0.50	Down
Tubule	209 ± 7	4 of 4	0.80	Down
Hindgut	128 ± 4	4 of 4	0.50	Down
Heart	177 ± 11	4 of 4	0.67	Down
Fat body	176 ± 12	4 of 4	0.67	Down
Ovary	658 ± 11	4 of 4	2.50	Up
Testis	119 ± 6	4 of 4	0.50	Down
Male accessory glands	269 ± 10	4 of 4	1.00	None
Virgin spermatheca	205 ± 9	4 of 4	0.78	Down
Mated spermatheca	187 ± 3	4 of 4	0.71	Down
Adult carcass	207 ± 8	4 of 4	0.80	Down
Larval CNS	728 ± 47	4 of 4	2.75	Up
Larval Salivary gland	224 ± 6	4 of 4	0.85	Down
Larval midgut	108 ± 2	1 of 4	0.41	Down
Larval tubule	137 ± 8	4 of 4	0.50	Down
Larval hindgut	187 ± 6	4 of 4	0.71	Down
Larval fat body	206 ± 7	4 of 4	0.80	Down
Larval trachea	229 ± 17	4 of 4	0.87	None
Larval carcass	221 ± 7	4 of 4	0.83	Down
S2 cells (growing)	395 ± 23	4 of 4	1.49	Up
Whole fly	264 ± 11	4 of 4

Looking for FBgn0027567. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720