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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027571 through 18771 annotations produced 1 hits



Fatty acid synthetase (CG3523):

Annotation Number : CG3523
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027571
Gbrowse : chr2L:3056614-3068177 (+) // 99.92 //
Probeset : 1624549_at
Accessions : protein= NP_001137778; /// NP_608748;, nucleotide= NM_001144306; /// NM_134904;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : "0000036 // acyl carrier activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred f
FlyMine data for FBgn0027571.
TRiP has 2 RNAi stocks for FBgn0027571 available for purchase.
VDRC has 2 RNAi stocks for FBgn0027571 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1140 ± 304 of 4 0.60Down
Head3363 ± 1984 of 4 1.60Up
Eye3116 ± 3114 of 4 1.52Up
Thoracicoabdominal ganglion1229 ± 444 of 4 0.60Down
Salivary gland162 ± 234 of 4 0.08Down
Crop5298 ± 2774 of 4 2.60Up
Midgut626 ± 224 of 4 0.30Down
Tubule669 ± 724 of 4 0.30Down
Hindgut2022 ± 114 of 4 1.00None
Heart6362 ± 3424 of 4 3.10Up
Fat body6204 ± 9134 of 4 3.02Up
Ovary435 ± 374 of 4 0.20Down
Testis184 ± 124 of 4 0.10Down
Male accessory glands97 ± 84 of 4 0.00Down
Virgin spermatheca6241 ± 2394 of 4 3.04Up
Mated spermatheca6349 ± 2644 of 4 3.09Up
Adult carcass6042 ± 1834 of 4 2.90Up
Larval CNS1369 ± 464 of 4 0.67Down
Larval Salivary gland413 ± 644 of 4 0.20Down
Larval midgut2930 ± 2864 of 4 1.43Up
Larval tubule254 ± 54 of 4 0.10Down
Larval hindgut1257 ± 744 of 4 0.61Down
Larval fat body2448 ± 2604 of 4 1.20None
Larval trachea865 ± 2444 of 4 0.42Down
Larval carcass476 ± 884 of 4 0.23Down
S2 cells (growing)3209 ± 514 of 4 1.56Up
Whole fly2052 ± 1124 of 4

Looking for FBgn0027571. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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