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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027592 through 18771 annotations produced 1 hits



Mediator complex subunit 15 (MED15):

Annotation Number : CG4184
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027592
Gbrowse : chr2L:473020-476176 (+) // 100.0 //
Probeset : 1638598_at
Accessions : protein= NP_608528;, nucleotide= NM_134684;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic an
Interpro : 0016455 // RNA polymerase II transcription mediator activity // inferred from electronic annotation /// 0016455 // RNA p
FlyMine data for FBgn0027592.
TRiP has 1 RNAi stocks for FBgn0027592 available for purchase.
VDRC has 1 RNAi stocks for FBgn0027592 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain96 14 of 4 0.90None
Head63 44 of 4 0.60Down
Eye55 34 of 4 0.51Down
Thoracicoabdominal ganglion91 14 of 4 0.80Down
Salivary gland115 74 of 4 1.06None
Crop75 54 of 4 0.70Down
Midgut60 24 of 4 0.60Down
Tubule53 14 of 4 0.50Down
Hindgut57 24 of 4 0.50Down
Heart48 44 of 4 0.45Down
Fat body62 64 of 4 0.57Down
Ovary225 24 of 4 2.10Up
Testis139 44 of 4 1.30Up
Male accessory glands126 104 of 4 1.20None
Virgin spermatheca56 34 of 4 0.52Down
Mated spermatheca74 54 of 4 0.68Down
Adult carcass59 64 of 4 0.50Down
Larval CNS260 84 of 4 2.40Up
Larval Salivary gland156 84 of 4 1.44Up
Larval midgut47 54 of 4 0.44Down
Larval tubule78 34 of 4 0.70Down
Larval hindgut95 24 of 4 0.87None
Larval fat body88 44 of 4 0.80Down
Larval trachea85 174 of 4 0.78None
Larval carcass67 24 of 4 0.62Down
S2 cells (growing)377 164 of 4 3.47Up
Whole fly108 54 of 4

Looking for FBgn0027592. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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