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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027780 through 18771 annotations produced 1 hits



U26 (U26):

Annotation Number : CG13401
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027780
Gbrowse : chr2L:8445860-8449571 (-) // 100.0 //
Probeset : 1629493_at
Accessions : protein= NP_609230;, nucleotide= NM_135386;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0027780.
VDRC has 3 RNAi stocks for FBgn0027780 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain81 14 of 4 2.30Up
Head41 24 of 4 1.20None
Eye26 24 of 4 0.75None
Thoracicoabdominal ganglion67 34 of 4 1.90Up
Salivary gland50 54 of 4 1.42None
Crop45 24 of 4 1.30None
Midgut45 34 of 4 1.30None
Tubule51 24 of 4 1.40Up
Hindgut41 24 of 4 1.20None
Heart17 24 of 4 0.50Down
Fat body31 44 of 4 0.87None
Ovary61 14 of 4 1.70Up
Testis6 03 of 4 0.20Down
Male accessory glands68 54 of 4 1.90Up
Virgin spermatheca31 14 of 4 0.88None
Mated spermatheca41 14 of 4 1.17None
Adult carcass35 24 of 4 1.00None
Larval CNS50 34 of 4 1.41Up
Larval Salivary gland55 14 of 4 1.57Up
Larval midgut25 04 of 4 0.72None
Larval tubule53 44 of 4 1.50Up
Larval hindgut29 14 of 4 0.81None
Larval fat body31 44 of 4 0.90None
Larval trachea28 14 of 4 0.79None
Larval carcass23 34 of 4 0.66Down
S2 cells (growing)49 04 of 4 1.39Up
Whole fly35 34 of 4

Looking for FBgn0027780. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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