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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027791 through 18771 annotations produced 1 hits



O-fucosyltransferase 2 (O-fut2):

Annotation Number : CG14789
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027791
Gbrowse : chrX:1358387-1360465 (-) // 100.0 //
Probeset : 1629180_at
Accessions : protein= NP_569916;, nucleotide= NM_130560;
Pathway : 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from ele
Interpro : "0008417 // fucosyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase ac
FlyMine data for FBgn0027791.
VDRC has 3 RNAi stocks for FBgn0027791 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain44 ± 24 of 4 0.50Down
Head65 ± 34 of 4 0.70Down
Eye90 ± 34 of 4 1.00None
Thoracicoabdominal ganglion57 ± 34 of 4 0.60Down
Salivary gland375 ± 244 of 4 4.14Up
Crop38 ± 34 of 4 0.40Down
Midgut72 ± 34 of 4 0.80Down
Tubule130 ± 124 of 4 1.40Up
Hindgut51 ± 34 of 4 0.60Down
Heart114 ± 44 of 4 1.26Up
Fat body109 ± 154 of 4 1.21None
Ovary134 ± 24 of 4 1.50Up
Testis21 ± 14 of 4 0.20Down
Male accessory glands482 ± 144 of 4 5.30Up
Virgin spermatheca135 ± 64 of 4 1.49Up
Mated spermatheca137 ± 54 of 4 1.52Up
Adult carcass75 ± 54 of 4 0.80None
Larval CNS157 ± 114 of 4 1.73Up
Larval Salivary gland120 ± 74 of 4 1.33Up
Larval midgut82 ± 74 of 4 0.90None
Larval tubule195 ± 94 of 4 2.20Up
Larval hindgut73 ± 34 of 4 0.81Down
Larval fat body116 ± 124 of 4 1.30None
Larval trachea91 ± 64 of 4 1.00None
Larval carcass73 ± 24 of 4 0.80Down
S2 cells (growing)317 ± 94 of 4 3.50Up
Whole fly90 ± 34 of 4

Looking for FBgn0027791. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime