FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027841 through 18771 annotations produced 1 hits

Cleavage stimulation factor 64 kilodalton subunit (CstF-64):

Annotation Number : CG7697
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027841
Gbrowse : chr3R:14485113-14486965 (+) // 100.0 //
Probeset : 1640568_at
Accessions : protein= NP_477453;, nucleotide= NM_058105;
Pathway : 0005848 // mRNA cleavage stimulating factor complex // inferred from sequence or structural similarity /// 0005848 // mR
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0027841.
BDGP gene expression has embryonic in situ data for CstF-64: 4 pix of staining in 1 body parts.
BioGrid reports that CG7697 interacts with CG7995 CG9184 CG9283 .
VDRC has 1 RNAi stocks for FBgn0027841 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 0	4 of 4	0.80	Down
Head	41 ± 1	2 of 4	0.60	Down
Eye	47 ± 4	4 of 4	0.66	Down
Thoracicoabdominal ganglion	58 ± 3	1 of 4	0.80	None
Salivary gland	87 ± 5	4 of 4	1.21	None
Crop	51 ± 2	0 of 4	0.70	Down
Midgut	49 ± 3	0 of 4	0.70	Down
Tubule	42 ± 3	0 of 4	0.60	Down
Hindgut	44 ± 1	0 of 4	0.60	Down
Heart	28 ± 0	2 of 4	0.40	Down
Fat body	45 ± 7	0 of 4	0.62	Down
Ovary	122 ± 3	4 of 4	1.70	Up
Testis	46 ± 1	4 of 4	0.60	Down
Male accessory glands	85 ± 4	2 of 4	1.20	None
Virgin spermatheca	51 ± 0	0 of 4	0.72	Down
Mated spermatheca	56 ± 0	0 of 4	0.78	Down
Adult carcass	38 ± 2	0 of 4	0.50	Down
Larval CNS	124 ± 5	4 of 4	1.72	Up
Larval Salivary gland	88 ± 0	3 of 4	1.22	Up
Larval midgut	53 ± 3	0 of 4	0.74	Down
Larval tubule	59 ± 5	0 of 4	0.80	None
Larval hindgut	59 ± 2	0 of 4	0.82	Down
Larval fat body	55 ± 4	1 of 4	0.80	Down
Larval trachea	64 ± 5	4 of 4	0.89	None
Larval carcass	68 ± 5	0 of 4	0.95	None
S2 cells (growing)	76 ± 5	2 of 4	1.05	None
Whole fly	72 ± 4	1 of 4

Looking for FBgn0027841. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720