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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0027885 through 18771 annotations produced 1 hits



Aac11 (Aac11):

Annotation Number : CG6582
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027885
Gbrowse : chr2L:17475494-17477886 (-) // 99.79 //
Probeset : 1623100_at
Accessions : protein= NP_477454;, nucleotide= NM_058106;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0027885.
BDGP gene expression has embryonic in situ data for Aac11: 4 pix of staining in 1 body parts.
BioGrid reports that CG6582 interacts with CG7269 .
VDRC has 3 RNAi stocks for FBgn0027885 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1296 ± 414 of 4 4.60Up
Head328 ± 194 of 4 1.20None
Eye430 ± 114 of 4 1.53Up
Thoracicoabdominal ganglion1251 ± 194 of 4 4.50Up
Salivary gland545 ± 394 of 4 1.94Up
Crop458 ± 204 of 4 1.60Up
Midgut247 ± 124 of 4 0.90None
Tubule351 ± 234 of 4 1.20Up
Hindgut303 ± 84 of 4 1.10None
Heart238 ± 154 of 4 0.85None
Fat body275 ± 244 of 4 0.98None
Ovary431 ± 184 of 4 1.50Up
Testis280 ± 94 of 4 1.00None
Male accessory glands822 ± 464 of 4 2.90Up
Virgin spermatheca198 ± 134 of 4 0.71Down
Mated spermatheca213 ± 84 of 4 0.76Down
Adult carcass237 ± 154 of 4 0.80None
Larval CNS1123 ± 874 of 4 3.99Up
Larval Salivary gland760 ± 104 of 4 2.71Up
Larval midgut188 ± 124 of 4 0.67Down
Larval tubule459 ± 324 of 4 1.60Up
Larval hindgut256 ± 84 of 4 0.91None
Larval fat body409 ± 204 of 4 1.50Up
Larval trachea736 ± 424 of 4 2.62Up
Larval carcass299 ± 64 of 4 1.06None
S2 cells (growing)481 ± 124 of 4 1.71Up
Whole fly281 ± 144 of 4

Looking for FBgn0027885. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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