FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0027949 through 18771 annotations produced 1 hits

msb1l (msb1l):

Annotation Number : CG10364
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027949
Gbrowse : chr2L:19577704-19579131 (+) // 100.0 //
Probeset : 1631344_at
Accessions : protein= NP_609991;, nucleotide= NM_136147;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0027949.
BDGP gene expression has embryonic in situ data for msb1l: 12 pix of staining in 8 body parts.
BioGrid reports that CG10364 interacts with CG12363 CG1678 CG4053 CG4335 CG8584 CG12775 CG12885 CG14025 CG14301 CG16853 CG2168 CG2233 CG30011 CG3186 CG7283 CG8280 CG8922 CG8975 CG9075 CG9091 CG9610 .
VDRC has 2 RNAi stocks for FBgn0027949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.00	Down
Head	2 ± 1	0 of 4	0.00	Down
Eye	1 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	5 ± 0	0 of 4	0.02	Down
Crop	4 ± 1	0 of 4	0.00	Down
Midgut	13 ± 3	0 of 4	0.00	Down
Tubule	4 ± 2	0 of 4	0.00	Down
Hindgut	4 ± 1	0 of 4	0.00	Down
Heart	1 ± 0	0 of 4	0.00	Down
Fat body	4 ± 5	0 of 4	0.02	Down
Ovary	696 ± 13	4 of 4	2.40	Up
Testis	424 ± 5	4 of 4	1.50	Up
Male accessory glands	0 ± 0	0 of 4	0.00	Down
Virgin spermatheca	2 ± 0	0 of 4	0.01	Down
Mated spermatheca	2 ± 0	0 of 4	0.01	Down
Adult carcass	7 ± 5	0 of 4	0.00	Down
Larval CNS	654 ± 26	4 of 4	2.25	Up
Larval Salivary gland	11 ± 0	0 of 4	0.04	Down
Larval midgut	18 ± 4	1 of 4	0.06	Down
Larval tubule	8 ± 3	0 of 4	0.00	Down
Larval hindgut	27 ± 3	3 of 4	0.09	Down
Larval fat body	98 ± 41	4 of 4	0.30	Down
Larval trachea	77 ± 12	4 of 4	0.27	Down
Larval carcass	58 ± 2	3 of 4	0.20	Down
S2 cells (growing)	435 ± 26	4 of 4	1.50	Up
Whole fly	291 ± 8	4 of 4

Looking for FBgn0027949. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720