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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0028360 through 18771 annotations produced 1 hits



lethal (1) G0148 (l(1)G0148):

Annotation Number : CG32742
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028360
Gbrowse : chrX:6548648-6553742 (+) // 100.0 //
Probeset : 1639411_at
Accessions : protein= NP_727103;, nucleotide= NM_167080;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0028360.
TRiP has 1 RNAi stocks for FBgn0028360 available for purchase.
VDRC has 5 RNAi stocks for FBgn0028360 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain184 ± 84 of 4 0.50Down
Head208 ± 274 of 4 0.60Down
Eye117 ± 64 of 4 0.34Down
Thoracicoabdominal ganglion115 ± 104 of 4 0.30Down
Salivary gland279 ± 164 of 4 0.80Down
Crop385 ± 194 of 4 1.10None
Midgut65 ± 14 of 4 0.20Down
Tubule257 ± 174 of 4 0.70Down
Hindgut121 ± 74 of 4 0.30Down
Heart423 ± 214 of 4 1.21Up
Fat body309 ± 584 of 4 0.89None
Ovary550 ± 44 of 4 1.60Up
Testis725 ± 234 of 4 2.10Up
Male accessory glands45 ± 24 of 4 0.10Down
Virgin spermatheca189 ± 224 of 4 0.54Down
Mated spermatheca160 ± 104 of 4 0.46Down
Adult carcass317 ± 324 of 4 0.90None
Larval CNS196 ± 144 of 4 0.56Down
Larval Salivary gland94 ± 94 of 4 0.27Down
Larval midgut107 ± 64 of 4 0.31Down
Larval tubule112 ± 74 of 4 0.30Down
Larval hindgut249 ± 74 of 4 0.72Down
Larval fat body232 ± 184 of 4 0.70Down
Larval trachea91 ± 84 of 4 0.26Down
Larval carcass314 ± 484 of 4 0.90None
S2 cells (growing)251 ± 34 of 4 0.72Down
Whole fly349 ± 204 of 4

Looking for FBgn0028360. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime