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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0028398 through 18771 annotations produced 1 hits



TBP-associated factor 24kD (Taf10):

Annotation Number : CG2859
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028398
Gbrowse : chr2L:2767911-2768613 (+) // 100.0 //
Probeset : 1635508_at
Accessions : protein= NP_477463;, nucleotide= NM_058115;
Pathway : 0000123 // histone acetyltransferase complex // inferred from sequence or structural similarity /// 0000124 // SAGA comp
Interpro : 0003702 // RNA polymerase II transcription factor activity // inferred from direct assay /// 0003702 // RNA polymerase I
FlyMine data for FBgn0028398.
BDGP gene expression has embryonic in situ data for Taf10: 10 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0028398 available for purchase.
VDRC has 3 RNAi stocks for FBgn0028398 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain219 ± 64 of 4 1.40Up
Head220 ± 114 of 4 1.40Up
Eye231 ± 54 of 4 1.53Up
Thoracicoabdominal ganglion267 ± 64 of 4 1.80Up
Salivary gland896 ± 254 of 4 5.90Up
Crop277 ± 94 of 4 1.80Up
Midgut203 ± 14 of 4 1.30Up
Tubule140 ± 24 of 4 0.90Down
Hindgut229 ± 34 of 4 1.50Up
Heart199 ± 84 of 4 1.31Up
Fat body182 ± 154 of 4 1.20Up
Ovary230 ± 24 of 4 1.50Up
Testis38 ± 24 of 4 0.30Down
Male accessory glands288 ± 134 of 4 1.90Up
Virgin spermatheca145 ± 64 of 4 0.96None
Mated spermatheca145 ± 54 of 4 0.96None
Adult carcass226 ± 114 of 4 1.50Up
Larval CNS274 ± 184 of 4 1.80Up
Larval Salivary gland903 ± 734 of 4 5.94Up
Larval midgut185 ± 64 of 4 1.22Up
Larval tubule327 ± 84 of 4 2.20Up
Larval hindgut177 ± 74 of 4 1.17None
Larval fat body295 ± 264 of 4 1.90Up
Larval trachea265 ± 84 of 4 1.75Up
Larval carcass141 ± 54 of 4 0.93None
S2 cells (growing)193 ± 14 of 4 1.27Up
Whole fly152 ± 74 of 4

Looking for FBgn0028398. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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