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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0028418 through 18771 annotations produced 1 hits



Leucokinin (Leucokinin):

Annotation Number : CG13480
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028418
Gbrowse : chr3L:14553233-14553864 (-) // 100.0 //
Probeset : 1625059_at
Accessions : protein= NP_524893;, nucleotide= NM_080154;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005179 // hormone activity // non-traceable author statement /// 0005184 // neuropeptide hormone activity // non-tracea
FlyMine data for FBgn0028418.
TRiP has 1 RNAi stocks for FBgn0028418 available for purchase.
VDRC has 1 RNAi stocks for FBgn0028418 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain165 64 of 4 5.20Up
Head54 12 of 4 1.70Up
Eye3 10 of 4 0.12Down
Thoracicoabdominal ganglion1537 334 of 447.90Up
Salivary gland13 30 of 4 0.41Down
Crop8 00 of 4 0.30Down
Midgut18 20 of 4 0.60Down
Tubule6 10 of 4 0.20Down
Hindgut8 20 of 4 0.30Down
Heart3 00 of 4 0.09Down
Fat body15 30 of 4 0.49Down
Ovary6 10 of 4 0.20Down
Testis1 00 of 4 0.10Down
Male accessory glands11 20 of 4 0.30Down
Virgin spermatheca15 10 of 4 0.48Down
Mated spermatheca5 00 of 4 0.16Down
Adult carcass43 61 of 4 1.40None
Larval CNS393 534 of 412.26Up
Larval Salivary gland4 10 of 4 0.15Down
Larval midgut2 00 of 4 0.08Down
Larval tubule4 10 of 4 0.10Down
Larval hindgut7 20 of 4 0.24Down
Larval fat body8 30 of 4 0.30Down
Larval trachea2 20 of 4 0.09Down
Larval carcass4 10 of 4 0.14Down
S2 cells (growing)4 10 of 4 0.15Down
Whole fly32 11 of 4

Looking for FBgn0028418. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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