FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028497 through 18771 annotations produced 1 hits

MYOTUBULARIN-like (CG3530):

Annotation Number : CG3530
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028497
Gbrowse : chr2R:19276528-19284202 (-) // 100.0 //
Probeset : 1638043_a_at
Accessions : protein= NP_001097433; /// NP_611791; /// NP_726322;, nucleotide= NM_001103963; /// NM_137947; /// NM_166603;
Interpro : 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/
FlyMine data for FBgn0028497.
BDGP gene expression has embryonic in situ data for BcDNA:GH04637: 4 pix of staining in 1 body parts.
Homophila reports that CG3530 is a close match (9e-34) to human gene CMT4B2;MTMR13;SBF2 (NP_112224), a gene associated with Charcot-Marie-Tooth disease, type 4B2, 604563 (3).
BioGrid reports that CG3530 interacts with CG5175 .
TRiP has 2 RNAi stocks for FBgn0028497 available for purchase.
VDRC has 3 RNAi stocks for FBgn0028497 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1317 ± 41	4 of 4	9.40	Up
Head	416 ± 21	4 of 4	3.00	Up
Eye	453 ± 28	4 of 4	3.25	Up
Thoracicoabdominal ganglion	1152 ± 25	4 of 4	8.20	Up
Salivary gland	184 ± 6	4 of 4	1.32	Up
Crop	136 ± 2	4 of 4	1.00	None
Midgut	130 ± 0	4 of 4	0.90	None
Tubule	135 ± 2	4 of 4	1.00	None
Hindgut	128 ± 2	4 of 4	0.90	None
Heart	110 ± 7	4 of 4	0.79	None
Fat body	105 ± 8	4 of 4	0.76	Down
Ovary	158 ± 1	4 of 4	1.10	None
Testis	78 ± 2	4 of 4	0.60	Down
Male accessory glands	151 ± 6	4 of 4	1.10	None
Virgin spermatheca	145 ± 6	4 of 4	1.04	None
Mated spermatheca	148 ± 1	4 of 4	1.06	None
Adult carcass	95 ± 5	4 of 4	0.70	Down
Larval CNS	497 ± 30	4 of 4	3.56	Up
Larval Salivary gland	127 ± 1	4 of 4	0.91	None
Larval midgut	193 ± 12	4 of 4	1.38	Up
Larval tubule	163 ± 3	4 of 4	1.20	None
Larval hindgut	168 ± 13	4 of 4	1.21	None
Larval fat body	118 ± 7	4 of 4	0.80	None
Larval trachea	150 ± 15	4 of 4	1.08	None
Larval carcass	91 ± 2	4 of 4	0.65	Down
S2 cells (growing)	269 ± 3	4 of 4	1.93	Up
Whole fly	139 ± 9	4 of 4

Looking for FBgn0028497. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720