FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028744 through 18771 annotations produced 1 hits

(CG5033):

Annotation Number : CG5033
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028744
Gbrowse : chr2R:13677196-13679959 (+) // 100.0 //
Probeset : 1636468_a_at
Accessions : protein= NP_611270; /// NP_725721;, nucleotide= NM_137426; /// NM_166248;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotat
Interpro : 0043021 // ribonucleoprotein binding // inferred from sequence or structural similarity
FlyMine data for FBgn0028744.
BDGP gene expression has embryonic in situ data for EG:52C10.1: 37 pix of staining in 28 body parts.
BioGrid reports that CG5033 interacts with CG5642 .
TRiP has 1 RNAi stocks for FBgn0028744 available for purchase.
VDRC has 2 RNAi stocks for FBgn0028744 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	38 ± 1	4 of 4	0.30	Down
Head	57 ± 2	4 of 4	0.40	Down
Eye	31 ± 3	4 of 4	0.22	Down
Thoracicoabdominal ganglion	35 ± 1	4 of 4	0.20	Down
Salivary gland	93 ± 3	4 of 4	0.65	Down
Crop	68 ± 5	4 of 4	0.50	Down
Midgut	81 ± 3	4 of 4	0.60	Down
Tubule	106 ± 17	4 of 4	0.70	Down
Hindgut	61 ± 1	4 of 4	0.40	Down
Heart	45 ± 2	4 of 4	0.31	Down
Fat body	89 ± 11	4 of 4	0.62	Down
Ovary	306 ± 4	4 of 4	2.10	Up
Testis	26 ± 3	4 of 4	0.20	Down
Male accessory glands	167 ± 10	4 of 4	1.20	None
Virgin spermatheca	76 ± 5	4 of 4	0.53	Down
Mated spermatheca	98 ± 1	4 of 4	0.68	Down
Adult carcass	57 ± 5	4 of 4	0.40	Down
Larval CNS	189 ± 5	4 of 4	1.31	Up
Larval Salivary gland	145 ± 9	4 of 4	1.01	None
Larval midgut	59 ± 4	4 of 4	0.41	Down
Larval tubule	31 ± 0	4 of 4	0.20	Down
Larval hindgut	92 ± 11	4 of 4	0.64	Down
Larval fat body	29 ± 4	4 of 4	0.20	Down
Larval trachea	142 ± 19	4 of 4	0.99	None
Larval carcass	123 ± 29	4 of 4	0.86	None
S2 cells (growing)	231 ± 5	4 of 4	1.60	Up
Whole fly	144 ± 9	4 of 4

Looking for FBgn0028744. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720