FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028871 through 18771 annotations produced 1 hits

CG3474 (Cpr35B):

Annotation Number : CG3474
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028871
Gbrowse : chr2L:14424412-14425131 (-) // 100.0 //
Probeset : 1627681_at
Accessions : protein= NP_609713;, nucleotide= NM_135869;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0005515
FlyMine data for FBgn0028871.
BioGrid reports that CG3474 interacts with CG3557 CG4511 CG8942 CG9572 .
VDRC has 2 RNAi stocks for FBgn0028871 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.40	Down
Head	5 ± 0	0 of 4	0.80	None
Eye	6 ± 1	1 of 4	0.90	None
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.40	Down
Salivary gland	7 ± 2	0 of 4	0.94	None
Crop	5 ± 1	1 of 4	0.80	None
Midgut	3 ± 0	0 of 4	0.50	Down
Tubule	4 ± 0	0 of 4	0.60	Down
Hindgut	6 ± 2	0 of 4	0.80	None
Heart	4 ± 0	0 of 4	0.61	Down
Fat body	6 ± 5	0 of 4	0.90	None
Ovary	5 ± 1	1 of 4	0.70	None
Testis	2 ± 1	0 of 4	0.30	Down
Male accessory glands	5 ± 1	1 of 4	0.70	None
Virgin spermatheca	3 ± 0	0 of 4	0.48	Down
Mated spermatheca	5 ± 1	0 of 4	0.69	None
Adult carcass	4 ± 2	0 of 4	0.60	None
Larval CNS	4 ± 2	0 of 4	0.58	None
Larval Salivary gland	5 ± 0	0 of 4	0.76	None
Larval midgut	8 ± 1	1 of 4	1.13	None
Larval tubule	2 ± 1	0 of 4	0.30	Down
Larval hindgut	7 ± 1	1 of 4	0.97	None
Larval fat body	3 ± 1	0 of 4	0.50	None
Larval trachea	8 ± 4	1 of 4	1.17	None
Larval carcass	10 ± 1	0 of 4	1.33	None
S2 cells (growing)	5 ± 1	0 of 4	0.73	None
Whole fly	7 ± 0	2 of 4

Looking for FBgn0028871. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720