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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0028902 through 18771 annotations produced 1 hits


TEKTIN A (Tektin-A):

Annotation Number : CG4767
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028902
Gbrowse : chr2L:15854125-15856450 (+) // 99.82 //
Probeset : 1625669_at
Accessions : protein= NP_523577;, nucleotide= NM_078853;
Pathway : 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from seq
FlyMine data for FBgn0028902.
BDGP gene expression has embryonic in situ data for Tektin-A: 14 pix of staining in 3 body parts.
BioGrid reports that CG4767 interacts with CG6570 CG8292 Dmel CG34168 CG5005 CG6156 CG6175 CG6232 CG7001 CG7570 CG8947 CG9075 CG9184 CG9572 .
VDRC has 2 RNAi stocks for FBgn0028902 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head0 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland7 ± 40 of 4 0.07Down
Crop1 ± 00 of 4 0.00Down
Midgut2 ± 10 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart1 ± 00 of 4 0.02Down
Fat body0 ± 00 of 4 0.01Down
Ovary1 ± 00 of 4 0.00Down
Testis1348 ± 684 of 413.20Up
Male accessory glands3 ± 10 of 4 0.00Down
Virgin spermatheca1 ± 00 of 4 0.01Down
Mated spermatheca1 ± 00 of 4 0.01Down
Adult carcass1 ± 00 of 4 0.00Down
Larval CNS1 ± 10 of 4 0.01Down
Larval Salivary gland2 ± 10 of 4 0.02Down
Larval midgut3 ± 10 of 4 0.03Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut0 ± 00 of 4 0.01Down
Larval fat body117 ± 614 of 4 1.20None
Larval trachea2 ± 40 of 4 0.03Down
Larval carcass3 ± 10 of 4 0.04Down
S2 cells (growing)1 ± 00 of 4 0.02Down
Whole fly101 ± 144 of 4

Looking for FBgn0028902. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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