FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028956 through 18771 annotations produced 1 hits

mth-like 3 (mthl3):

Annotation Number : CG6530
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028956
Gbrowse : chr2R:13336037-13340099 (-) // 100.0 //
Probeset : 1637658_at
Accessions : protein= NP_663308;, nucleotide= NM_145335;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0028956.
BioGrid reports that CG6530 interacts with CG7917 CG8981 .
TRiP has 2 RNAi stocks for FBgn0028956 available for purchase.
VDRC has 3 RNAi stocks for FBgn0028956 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	3 of 4	0.40	Down
Head	14 ± 1	4 of 4	0.70	Down
Eye	16 ± 3	3 of 4	0.78	None
Thoracicoabdominal ganglion	11 ± 0	1 of 4	0.50	Down
Salivary gland	49 ± 3	4 of 4	2.34	Up
Crop	59 ± 2	4 of 4	2.80	Up
Midgut	45 ± 2	4 of 4	2.20	Up
Tubule	130 ± 4	4 of 4	6.20	Up
Hindgut	56 ± 1	4 of 4	2.70	Up
Heart	63 ± 3	4 of 4	3.00	Up
Fat body	44 ± 1	4 of 4	2.12	Up
Ovary	18 ± 0	4 of 4	0.90	None
Testis	20 ± 1	4 of 4	1.00	None
Male accessory glands	44 ± 4	4 of 4	2.10	Up
Virgin spermatheca	16 ± 2	4 of 4	0.80	None
Mated spermatheca	18 ± 1	4 of 4	0.86	None
Adult carcass	35 ± 2	4 of 4	1.70	Up
Larval CNS	220 ± 23	4 of 4	10.46	Up
Larval Salivary gland	182 ± 15	4 of 4	8.67	Up
Larval midgut	200 ± 20	4 of 4	9.51	Up
Larval tubule	731 ± 16	4 of 4	34.70	Up
Larval hindgut	470 ± 25	4 of 4	22.33	Up
Larval fat body	263 ± 19	4 of 4	12.50	Up
Larval trachea	1040 ± 74	4 of 4	49.42	Up
Larval carcass	565 ± 28	4 of 4	26.86	Up
S2 cells (growing)	282 ± 3	4 of 4	13.43	Up
Whole fly	21 ± 1	4 of 4

Looking for FBgn0028956. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720