FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028982 through 18771 annotations produced 1 hits

Spt6 (Spt6):

Annotation Number : CG12225
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028982
Gbrowse : chrX:6161846-6169019 (+) // 100.0 //
Probeset : 1634924_at
Accessions : protein= NP_651962;, nucleotide= NM_143705;
Pathway : nucleoside
Interpro : nucleotide and nucleic acid metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // infer
FlyMine data for FBgn0028982.
BDGP gene expression has embryonic in situ data for Spt6: 4 pix of staining in 1 body parts.
BioGrid reports that CG12225 interacts with CG6249 CG6413 CG8025 CG3931 CG7292 CG8395 CG4043 CG15481 CG7292 CG8025 CG3931 .
TRiP has 1 RNAi stocks for FBgn0028982 available for purchase.
VDRC has 2 RNAi stocks for FBgn0028982 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	306 ± 8	4 of 4	1.20	Up
Head	237 ± 14	4 of 4	0.90	None
Eye	258 ± 6	4 of 4	0.97	None
Thoracicoabdominal ganglion	336 ± 17	4 of 4	1.30	Up
Salivary gland	446 ± 10	4 of 4	1.69	Up
Crop	254 ± 2	4 of 4	1.00	None
Midgut	203 ± 2	4 of 4	0.80	Down
Tubule	212 ± 7	4 of 4	0.80	Down
Hindgut	221 ± 4	4 of 4	0.80	Down
Heart	238 ± 5	4 of 4	0.90	None
Fat body	314 ± 19	4 of 4	1.19	Up
Ovary	555 ± 8	4 of 4	2.10	Up
Testis	50 ± 2	4 of 4	0.20	Down
Male accessory glands	674 ± 19	4 of 4	2.50	Up
Virgin spermatheca	358 ± 12	4 of 4	1.35	Up
Mated spermatheca	359 ± 10	4 of 4	1.36	Up
Adult carcass	284 ± 29	4 of 4	1.10	None
Larval CNS	689 ± 33	4 of 4	2.60	Up
Larval Salivary gland	710 ± 34	4 of 4	2.68	Up
Larval midgut	330 ± 7	4 of 4	1.25	Up
Larval tubule	305 ± 5	4 of 4	1.20	Up
Larval hindgut	367 ± 14	4 of 4	1.39	Up
Larval fat body	203 ± 15	4 of 4	0.80	Down
Larval trachea	332 ± 23	4 of 4	1.25	Up
Larval carcass	347 ± 14	4 of 4	1.31	Up
S2 cells (growing)	218 ± 5	4 of 4	0.82	Down
Whole fly	265 ± 11	4 of 4

Looking for FBgn0028982. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720