FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0028996 through 18771 annotations produced 1 hits

chr4:619179-628119 (-) // 100.0 // (D-onecut):

Annotation Number : CG1922
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1630376_at
Accessions : protein= , nucleotide= NP_524842;
Pathway : "0006350 // transcription // inferred from sequence or structural similarity /// 0006350 // transcription // inferred fr
Interpro : DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	482 ± 40	4 of 4	26.90	Up
Head	132 ± 15	4 of 4	7.40	Up
Eye	38 ± 2	4 of 4	2.12	Up
Thoracicoabdominal ganglion	354 ± 30	4 of 4	19.80	Up
Salivary gland	12 ± 1	1 of 4	0.69	None
Crop	6 ± 0	3 of 4	0.30	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 1	0 of 4	0.20	Down
Heart	1 ± 0	0 of 4	0.07	Down
Fat body	9 ± 4	3 of 4	0.52	None
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	8 ± 1	1 of 4	0.50	None
Virgin spermatheca	3 ± 0	0 of 4	0.17	Down
Mated spermatheca	4 ± 1	0 of 4	0.24	Down
Adult carcass	10 ± 2	3 of 4	0.60	None
Larval CNS	479 ± 112	4 of 4	26.81	Up
Larval Salivary gland	4 ± 0	1 of 4	0.24	Down
Larval midgut	3 ± 0	0 of 4	0.19	Down
Larval tubule	2 ± 1	1 of 4	0.10	Down
Larval hindgut	2 ± 0	2 of 4	0.14	Down
Larval fat body	1 ± 0	0 of 4	0.10	Down
Larval trachea	2 ± 1	1 of 4	0.16	Down
Larval carcass	2 ± 0	1 of 4	0.16	Down
S2 cells (growing)	1 ± 0	0 of 4	0.09	Down
Whole fly	17 ± 3	4 of 4

Looking for FBgn0028996. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720