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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029002 through 18771 annotations produced 1 hits



miple2 (miple2):

Annotation Number : CG18321
Flybase ID : FBgn0029002
Gbrowse : chr3L:271639-275021 (+) // 100.0 //
Probeset : 1637645_at
Accessions : protein= NP_651996;, nucleotide= NM_143739;
Pathway : 0005576 // extracellular region // inferred from direct assay
Interpro : 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from
FlyMine data for FBgn0029002.
BDGP gene expression has embryonic in situ data for miple2: 18 pix of staining in 21 body parts.
VDRC has 3 RNAi stocks for FBgn0029002 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain53 24 of 4 0.70Down
Head24 14 of 4 0.30Down
Eye17 24 of 4 0.23Down
Thoracicoabdominal ganglion36 34 of 4 0.50Down
Salivary gland12 20 of 4 0.16Down
Crop6 10 of 4 0.10Down
Midgut312 164 of 4 3.90Up
Tubule60 64 of 4 0.80Down
Hindgut52 34 of 4 0.70Down
Heart27 14 of 4 0.35Down
Fat body15 33 of 4 0.19Down
Ovary73 24 of 4 0.90None
Testis68 24 of 4 0.90Down
Male accessory glands7 20 of 4 0.10Down
Virgin spermatheca13 13 of 4 0.17Down
Mated spermatheca12 11 of 4 0.15Down
Adult carcass20 10 of 4 0.30Down
Larval CNS168 94 of 4 2.12Up
Larval Salivary gland21 14 of 4 0.27Down
Larval midgut134 74 of 4 1.70Up
Larval tubule154 184 of 4 1.90Up
Larval hindgut65 84 of 4 0.82None
Larval fat body866 1144 of 410.90Up
Larval trachea212 344 of 4 2.67Up
Larval carcass98 144 of 4 1.24None
S2 cells (growing)581 124 of 4 7.31Up
Whole fly79 24 of 4

Looking for FBgn0029002. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime