Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029091 through 18771 annotations produced 1 hits



Chitin Synthase A (CS-2):

Annotation Number : CG7464
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029091
Gbrowse : chr3L:21955461-21962767 (+) // 100.0 //
Probeset : 1630206_at
Accessions : protein= NP_001137997; /// NP_524209;, nucleotide= NM_001144525; /// NM_079485;
Interpro : "0004100 // chitin synthase activity // inferred from sequence or structural similarity /// 0004100 // chitin synthase a
FlyMine data for FBgn0029091.
VDRC has 2 RNAi stocks for FBgn0029091 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.10Down
Head2 ± 00 of 4 0.10Down
Eye7 ± 10 of 4 0.23Down
Thoracicoabdominal ganglion6 ± 00 of 4 0.20Down
Salivary gland11 ± 10 of 4 0.36Down
Crop0 ± 00 of 4 0.00Down
Midgut326 ± 44 of 410.40Up
Tubule115 ± 264 of 4 3.70Up
Hindgut478 ± 224 of 415.30Up
Heart4 ± 00 of 4 0.15Down
Fat body3 ± 10 of 4 0.11Down
Ovary0 ± 00 of 4 0.00Down
Testis12 ± 14 of 4 0.40Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca7 ± 01 of 4 0.23Down
Mated spermatheca4 ± 11 of 4 0.14Down
Adult carcass5 ± 10 of 4 0.20Down
Larval CNS2 ± 10 of 4 0.09Down
Larval Salivary gland5 ± 20 of 4 0.17Down
Larval midgut77 ± 04 of 4 2.48Up
Larval tubule138 ± 314 of 4 4.40Up
Larval hindgut496 ± 354 of 415.82Up
Larval fat body11 ± 20 of 4 0.40Down
Larval trachea3 ± 20 of 4 0.12Down
Larval carcass6 ± 10 of 4 0.22Down
S2 cells (growing)4 ± 00 of 4 0.16Down
Whole fly31 ± 54 of 4

Looking for FBgn0029091. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime