FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029095 through 18771 annotations produced 2 hits

arouser (aru):

Annotation Number : CG4276
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029095
Gbrowse : chr2L:861848-868352 (-) // 100.0 //
Probeset : 1629387_s_at
Accessions : protein= NP_523449; /// NP_722663; /// NP_722665;, nucleotide= NM_078725; /// NM_164393; /// NM_164395;
Pathway : engulfment // inferred from mutant phenotype /// 0007173 // epidermal growth factor receptor signaling pathway // infer
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
FlyMine data for FBgn0029095.
BioGrid reports that CG4276 interacts with CG5522 CG5654 CG9394 CG5089 CG5140 CG5346 CG5502 CG6040 CG6459 CG6695 CG7073 CG7283 CG7800 CG8159 CG8383 CG9028 CG9045 CG9426 CG9914 .
VDRC has 3 RNAi stocks for FBgn0029095 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	28 ± 2	4 of 4	0.30	Down
Head	170 ± 7	4 of 4	2.00	Up
Eye	290 ± 12	4 of 4	3.44	Up
Thoracicoabdominal ganglion	28 ± 2	3 of 4	0.30	Down
Salivary gland	186 ± 10	4 of 4	2.21	Up
Crop	1170 ± 37	4 of 4	13.90	Up
Midgut	16 ± 2	0 of 4	0.20	Down
Tubule	31 ± 3	3 of 4	0.40	Down
Hindgut	337 ± 9	4 of 4	4.00	Up
Heart	56 ± 3	4 of 4	0.67	Down
Fat body	43 ± 2	4 of 4	0.51	Down
Ovary	55 ± 3	4 of 4	0.70	Down
Testis	58 ± 5	4 of 4	0.70	Down
Male accessory glands	613 ± 38	4 of 4	7.30	Up
Virgin spermatheca	149 ± 10	4 of 4	1.77	Up
Mated spermatheca	194 ± 19	4 of 4	2.30	Up
Adult carcass	163 ± 13	4 of 4	1.90	Up
Larval CNS	36 ± 4	4 of 4	0.43	Down
Larval Salivary gland	131 ± 9	4 of 4	1.56	Up
Larval midgut	36 ± 3	4 of 4	0.43	Down
Larval tubule	45 ± 1	4 of 4	0.50	Down
Larval hindgut	248 ± 3	4 of 4	2.95	Up
Larval fat body	11 ± 3	0 of 4	0.10	Down
Larval trachea	845 ± 124	4 of 4	10.03	Up
Larval carcass	199 ± 3	4 of 4	2.37	Up
S2 cells (growing)	493 ± 21	4 of 4	5.85	Up
Whole fly	84 ± 3	4 of 4

chr2L:10408350-10410467 (+) // 100.0 // (arouser /// male female sterile 31):

Annotation Number : CG5271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1624906_at
Accessions : protein= , nucleotide= NP_476778;
Pathway : "0006325 // chromatin organization // non-traceable author statement /// 0006355 // regulation of transcription
Interpro : DNA-dependent // non-traceable author statement /// 0006412 // translation // inferred from sequence or structural simi
FlyMine data for full length.
BioGrid reports that CG5271 interacts with CG6667 CG7386 CG7546 CG7987 CG8079 CG9099 CG9119 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3257 ± 74	4 of 4	0.70	Down
Head	5205 ± 194	4 of 4	1.10	None
Eye	5692 ± 143	4 of 4	1.22	Up
Thoracicoabdominal ganglion	4710 ± 90	4 of 4	1.00	None
Salivary gland	12632 ± 416	4 of 4	2.70	Up
Crop	6799 ± 397	4 of 4	1.50	Up
Midgut	6050 ± 181	4 of 4	1.30	Up
Tubule	4356 ± 92	4 of 4	0.90	Down
Hindgut	5622 ± 126	4 of 4	1.20	Up
Heart	6443 ± 389	4 of 4	1.38	Up
Fat body	6531 ± 820	4 of 4	1.40	Up
Ovary	3951 ± 84	4 of 4	0.80	None
Testis	1653 ± 87	4 of 4	0.40	Down
Male accessory glands	10384 ± 199	4 of 4	2.20	Up
Virgin spermatheca	5897 ± 303	4 of 4	1.26	Up
Mated spermatheca	5993 ± 122	4 of 4	1.28	Up
Adult carcass	6314 ± 290	4 of 4	1.40	Up
Larval CNS	3008 ± 227	4 of 4	0.64	Down
Larval Salivary gland	9045 ± 477	4 of 4	1.94	Up
Larval midgut	5509 ± 158	4 of 4	1.18	None
Larval tubule	5652 ± 83	4 of 4	1.20	Up
Larval hindgut	4937 ± 113	4 of 4	1.06	None
Larval fat body	8813 ± 854	4 of 4	1.90	Up
Larval trachea	6319 ± 13	4 of 4	1.35	Up
Larval carcass	5265 ± 393	4 of 4	1.13	None
S2 cells (growing)	4792 ± 91	4 of 4	1.03	None
Whole fly	4673 ± 294	4 of 4

Looking for FBgn0029095. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720