Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029133 through 18771 annotations produced 1 hits



REG (REG):

Annotation Number : CG1591
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029133
Gbrowse : chrX:13106365-13108014 (+) // 100.0 //
Probeset : 1625849_at
Accessions : protein= NP_572866;, nucleotide= NM_132638;
Pathway : via spliceosome // inferred by curator /// 0061136 // regulation of proteasomal protein catabolic process // inferred f
Interpro : 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assa
FlyMine data for FBgn0029133.
BDGP gene expression has embryonic in situ data for REG: 20 pix of staining in 21 body parts.
BioGrid reports that CG1591 interacts with CG3162 CG18676 CG30092 CG4216 .
VDRC has 2 RNAi stocks for FBgn0029133 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain423 184 of 4 0.70Down
Head432 384 of 4 0.70Down
Eye552 154 of 4 0.89None
Thoracicoabdominal ganglion377 74 of 4 0.60Down
Salivary gland469 224 of 4 0.76None
Crop390 54 of 4 0.60Down
Midgut463 84 of 4 0.70None
Tubule247 164 of 4 0.40Down
Hindgut472 144 of 4 0.80None
Heart364 134 of 4 0.59Down
Fat body477 84 of 4 0.77None
Ovary800 154 of 4 1.30Up
Testis515 124 of 4 0.80None
Male accessory glands1168 294 of 4 1.90Up
Virgin spermatheca381 174 of 4 0.62Down
Mated spermatheca405 264 of 4 0.65Down
Adult carcass370 94 of 4 0.60Down
Larval CNS967 424 of 4 1.56Up
Larval Salivary gland684 354 of 4 1.10None
Larval midgut371 184 of 4 0.60Down
Larval tubule190 74 of 4 0.30Down
Larval hindgut474 234 of 4 0.76None
Larval fat body209 64 of 4 0.30Down
Larval trachea751 724 of 4 1.21None
Larval carcass546 634 of 4 0.88None
S2 cells (growing)1073 54 of 4 1.73Up
Whole fly620 584 of 4

Looking for FBgn0029133. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime