FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029148 through 18771 annotations produced 1 hits

NHP2 (NHP2):

Annotation Number : CG5258
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029148
Gbrowse : chr3L:14794489-14795289 (-) // 100.0 //
Probeset : 1627111_at
Accessions : protein= NP_651965;, nucleotide= NM_143708;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // non-traceable author statement ///
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical i
FlyMine data for FBgn0029148.
BDGP gene expression has embryonic in situ data for NHP2: 16 pix of staining in 25 body parts.
BioGrid reports that CG5258 interacts with CG6094 .
VDRC has 2 RNAi stocks for FBgn0029148 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	115 ± 2	4 of 4	0.20	Down
Head	239 ± 20	4 of 4	0.40	Down
Eye	145 ± 7	4 of 4	0.22	Down
Thoracicoabdominal ganglion	163 ± 7	4 of 4	0.20	Down
Salivary gland	285 ± 10	4 of 4	0.43	Down
Crop	280 ± 15	4 of 4	0.40	Down
Midgut	334 ± 13	4 of 4	0.50	Down
Tubule	160 ± 42	4 of 4	0.20	Down
Hindgut	216 ± 5	4 of 4	0.30	Down
Heart	223 ± 19	4 of 4	0.34	Down
Fat body	340 ± 48	4 of 4	0.52	Down
Ovary	1101 ± 19	4 of 4	1.70	Up
Testis	87 ± 4	4 of 4	0.10	Down
Male accessory glands	799 ± 40	4 of 4	1.20	Up
Virgin spermatheca	384 ± 34	4 of 4	0.58	Down
Mated spermatheca	619 ± 22	4 of 4	0.94	None
Adult carcass	252 ± 9	4 of 4	0.40	Down
Larval CNS	804 ± 25	4 of 4	1.22	Up
Larval Salivary gland	662 ± 41	4 of 4	1.01	None
Larval midgut	244 ± 22	4 of 4	0.37	Down
Larval tubule	99 ± 3	4 of 4	0.20	Down
Larval hindgut	342 ± 43	4 of 4	0.52	Down
Larval fat body	147 ± 13	4 of 4	0.20	Down
Larval trachea	885 ± 207	4 of 4	1.35	None
Larval carcass	512 ± 138	4 of 4	0.78	None
S2 cells (growing)	654 ± 14	4 of 4	0.99	None
Whole fly	657 ± 17	4 of 4

Looking for FBgn0029148. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720