FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029176 through 18771 annotations produced 1 hits

Ef1gamma (Ef1gamma):

Annotation Number : CG11901
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029176
Gbrowse : chr3R:25045887-25047835 (+) // 100.0 //
Probeset : 1638607_s_at
Accessions : protein= NP_652000; /// NP_733280;, nucleotide= NM_143743; /// NM_170401;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005811 // l
Interpro : 0003746 // translation elongation factor activity // inferred from sequence or structural similarity /// 0003746 // tran
FlyMine data for FBgn0029176.
BDGP gene expression has embryonic in situ data for Ef1gamma: 4 pix of staining in 1 body parts.
BioGrid reports that CG11901 interacts with CG12623 CG12935 CG13317 CG13576 CG17377 CG2091 CG30011 CG3003 CG30122 CG3193 CG32451 CG3630 CG6341 CG6353 CG7146 CG8851 CG9212 CG9986 Dmel CG14425 Dmel CG34397 .
VDRC has 2 RNAi stocks for FBgn0029176 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	737 ± 49	4 of 4	0.30	Down
Head	2271 ± 82	4 of 4	1.00	None
Eye	2614 ± 93	4 of 4	1.12	Up
Thoracicoabdominal ganglion	1400 ± 33	4 of 4	0.60	Down
Salivary gland	4236 ± 185	4 of 4	1.82	Up
Crop	3495 ± 93	4 of 4	1.50	Up
Midgut	2538 ± 88	4 of 4	1.10	None
Tubule	2440 ± 144	4 of 4	1.00	None
Hindgut	3068 ± 111	4 of 4	1.30	Up
Heart	4390 ± 351	4 of 4	1.89	Up
Fat body	4751 ± 949	4 of 4	2.04	Up
Ovary	2314 ± 31	4 of 4	1.00	None
Testis	555 ± 35	4 of 4	0.20	Down
Male accessory glands	5016 ± 335	4 of 4	2.20	Up
Virgin spermatheca	4925 ± 190	4 of 4	2.12	Up
Mated spermatheca	5052 ± 72	4 of 4	2.17	Up
Adult carcass	4015 ± 219	4 of 4	1.70	Up
Larval CNS	2364 ± 215	4 of 4	1.02	None
Larval Salivary gland	6515 ± 328	4 of 4	2.80	Up
Larval midgut	3856 ± 118	4 of 4	1.66	Up
Larval tubule	2616 ± 53	4 of 4	1.10	Up
Larval hindgut	3924 ± 110	4 of 4	1.69	Up
Larval fat body	4810 ± 465	4 of 4	2.10	Up
Larval trachea	4701 ± 125	4 of 4	2.02	Up
Larval carcass	4317 ± 297	4 of 4	1.86	Up
S2 cells (growing)	3656 ± 70	4 of 4	1.57	Up
Whole fly	2325 ± 30	4 of 4

Looking for FBgn0029176. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720