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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029502 through 18771 annotations produced 1 hits



COQ7 (COQ7):

Annotation Number : CG14437
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029502
Gbrowse : chrX:6665268-6667072 (+) // 100.0 //
Probeset : 1635151_at
Accessions : protein= NP_651967;, nucleotide= NM_143710;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from
FlyMine data for FBgn0029502.
VDRC has 3 RNAi stocks for FBgn0029502 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain375 ± 84 of 4 2.20Up
Head195 ± 44 of 4 1.10None
Eye240 ± 114 of 4 1.39Up
Thoracicoabdominal ganglion334 ± 154 of 4 1.90Up
Salivary gland182 ± 214 of 4 1.05None
Crop125 ± 54 of 4 0.70Down
Midgut154 ± 44 of 4 0.90None
Tubule188 ± 154 of 4 1.10None
Hindgut346 ± 154 of 4 2.00Up
Heart152 ± 44 of 4 0.88None
Fat body73 ± 84 of 4 0.42Down
Ovary167 ± 64 of 4 1.00None
Testis43 ± 14 of 4 0.30Down
Male accessory glands135 ± 64 of 4 0.80Down
Virgin spermatheca47 ± 24 of 4 0.27Down
Mated spermatheca52 ± 64 of 4 0.30Down
Adult carcass234 ± 214 of 4 1.40None
Larval CNS117 ± 74 of 4 0.68Down
Larval Salivary gland168 ± 84 of 4 0.97None
Larval midgut114 ± 94 of 4 0.66Down
Larval tubule193 ± 54 of 4 1.10None
Larval hindgut210 ± 124 of 4 1.22None
Larval fat body64 ± 94 of 4 0.40Down
Larval trachea146 ± 154 of 4 0.84None
Larval carcass123 ± 54 of 4 0.71Down
S2 cells (growing)195 ± 34 of 4 1.13None
Whole fly173 ± 114 of 4

Looking for FBgn0029502. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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