Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029522 through 18771 annotations produced 1 hits



(CG13373):

Annotation Number : CG13373
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029522
Gbrowse : chrX:371553-372216 (+) // 100.0 //
Probeset : 1636730_at
Accessions : protein= NP_001096858; /// NP_569840;, nucleotide= NM_001103388; /// NM_130484;
FlyMine data for FBgn0029522.
BDGP gene expression has embryonic in situ data for CG13373: 4 pix of staining in 1 body parts.
BioGrid reports that CG13373 interacts with CG3858 CG9975 CG1034 CG1725 CG18094 CG3018 Dmel CG34159 CG14534 CG5708 CG14387 CG11182 CG11138 CG13806 CG32139 CG32045 CG31679 CG14619 CG9842 CG8591 CG17309 CG10021 CG4184 CG13900 CG17964 CG10571 CG32169 CG1765 CG10395 CG31811 CG4385 CG4851 CG9027 .
VDRC has 3 RNAi stocks for FBgn0029522 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 ± 14 of 4 0.10Down
Head22 ± 14 of 4 0.10Down
Eye19 ± 04 of 4 0.13Down
Thoracicoabdominal ganglion24 ± 24 of 4 0.20Down
Salivary gland44 ± 34 of 4 0.29Down
Crop48 ± 34 of 4 0.30Down
Midgut31 ± 44 of 4 0.20Down
Tubule25 ± 24 of 4 0.20Down
Hindgut36 ± 54 of 4 0.20Down
Heart18 ± 14 of 4 0.12Down
Fat body36 ± 94 of 4 0.24Down
Ovary558 ± 164 of 4 3.70Up
Testis81 ± 74 of 4 0.50Down
Male accessory glands54 ± 24 of 4 0.40Down
Virgin spermatheca37 ± 54 of 4 0.25Down
Mated spermatheca46 ± 44 of 4 0.30Down
Adult carcass30 ± 33 of 4 0.20Down
Larval CNS75 ± 104 of 4 0.50Down
Larval Salivary gland38 ± 64 of 4 0.26Down
Larval midgut32 ± 14 of 4 0.21Down
Larval tubule34 ± 44 of 4 0.20Down
Larval hindgut31 ± 34 of 4 0.21Down
Larval fat body36 ± 14 of 4 0.20Down
Larval trachea40 ± 44 of 4 0.27Down
Larval carcass33 ± 44 of 4 0.22Down
S2 cells (growing)48 ± 24 of 4 0.32Down
Whole fly151 ± 234 of 4

Looking for FBgn0029522. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime