Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029645 through 18771 annotations produced 1 hits



(CG14422):

Annotation Number : CG14422
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029645
Gbrowse : chrX:2837508-2838529 (+) // 100.0 //
Probeset : 1640819_at
Accessions : protein= NP_570043;, nucleotide= NM_130687;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0029645.
BioGrid reports that CG14422 interacts with CG3630 .
VDRC has 2 RNAi stocks for FBgn0029645 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 2.40None
Head0 ± 00 of 4 1.90None
Eye1 ± 00 of 4 3.20Up
Thoracicoabdominal ganglion1 ± 00 of 4 3.10None
Salivary gland6 ± 20 of 417.07None
Crop2 ± 10 of 4 6.90None
Midgut0 ± 00 of 4 1.70None
Tubule1 ± 00 of 4 3.30Up
Hindgut0 ± 00 of 4 1.50None
Heart0 ± 00 of 4 2.20Up
Fat body0 ± 00 of 4 1.93None
Ovary0 ± 00 of 4 1.40None
Testis1 ± 00 of 4 2.50None
Male accessory glands2 ± 10 of 4 7.60None
Virgin spermatheca1 ± 00 of 4 4.07None
Mated spermatheca0 ± 00 of 4 1.53Up
Adult carcass4 ± 20 of 411.30None
Larval CNS0 ± 00 of 4 1.47None
Larval Salivary gland6 ± 00 of 417.27Up
Larval midgut0 ± 00 of 4 1.53Up
Larval tubule0 ± 00 of 4 1.50Up
Larval hindgut0 ± 00 of 4 2.33Up
Larval fat body0 ± 00 of 4 2.30None
Larval trachea1 ± 10 of 4 5.00None
Larval carcass0 ± 00 of 4 2.60None
S2 cells (growing)0 ± 00 of 4 1.27None
Whole fly0 ± 00 of 4

Looking for FBgn0029645. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime