FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029657 through 18771 annotations produced 2 hits

(CG12535):

Annotation Number : CG12535
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029657
Gbrowse : chrX:3286661-3287447 (-) // 100.0 //
Probeset : 1635794_a_at
Accessions : protein= NP_726860;, nucleotide= NM_166972;
FlyMine data for FBgn0029657.
VDRC has 3 RNAi stocks for FBgn0029657 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	12 ± 2	1 of 4	0.40	Down
Eye	2 ± 0	0 of 4	0.07	Down
Thoracicoabdominal ganglion	1 ± 1	0 of 4	0.10	Down
Salivary gland	2 ± 0	0 of 4	0.08	Down
Crop	4 ± 1	0 of 4	0.10	Down
Midgut	8 ± 2	0 of 4	0.30	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	5 ± 2	0 of 4	0.20	Down
Heart	2 ± 1	0 of 4	0.10	Down
Fat body	5 ± 3	0 of 4	0.19	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	366 ± 20	4 of 4	12.70	Up
Male accessory glands	13 ± 3	0 of 4	0.50	Down
Virgin spermatheca	4 ± 1	0 of 4	0.17	Down
Mated spermatheca	4 ± 2	0 of 4	0.14	Down
Adult carcass	18 ± 7	1 of 4	0.60	None
Larval CNS	5 ± 1	0 of 4	0.18	Down
Larval Salivary gland	3 ± 0	0 of 4	0.12	Down
Larval midgut	3 ± 0	0 of 4	0.11	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	3 ± 1	0 of 4	0.12	Down
Larval fat body	43 ± 20	1 of 4	1.50	None
Larval trachea	3 ± 3	0 of 4	0.12	Down
Larval carcass	1 ± 0	0 of 4	0.06	Down
S2 cells (growing)	83 ± 2	4 of 4	2.89	Up
Whole fly	28 ± 1	4 of 4

(CG12535):

Annotation Number : CG12535
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029657
Gbrowse : chrX:3286661-3287447 (-) // 100.0 //
Probeset : 1630001_at
Accessions : protein= NP_726860;, nucleotide= NM_166972;
FlyMine data for FBgn0029657.
VDRC has 3 RNAi stocks for FBgn0029657 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.10	Down
Head	5 ± 1	0 of 4	0.30	Down
Eye	1 ± 0	0 of 4	0.08	Down
Thoracicoabdominal ganglion	3 ± 2	0 of 4	0.10	Down
Salivary gland	4 ± 1	0 of 4	0.20	Down
Crop	2 ± 1	0 of 4	0.10	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	6 ± 5	0 of 4	0.32	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	328 ± 21	4 of 4	15.60	Up
Male accessory glands	11 ± 3	1 of 4	0.60	None
Virgin spermatheca	2 ± 0	0 of 4	0.11	Down
Mated spermatheca	2 ± 1	0 of 4	0.11	Down
Adult carcass	10 ± 5	1 of 4	0.50	None
Larval CNS	4 ± 3	0 of 4	0.19	Down
Larval Salivary gland	3 ± 1	0 of 4	0.16	Down
Larval midgut	1 ± 0	0 of 4	0.06	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	1 ± 1	0 of 4	0.09	Down
Larval fat body	51 ± 26	2 of 4	2.40	None
Larval trachea	2 ± 1	0 of 4	0.13	Down
Larval carcass	2 ± 1	0 of 4	0.14	Down
S2 cells (growing)	52 ± 4	4 of 4	2.51	Up
Whole fly	21 ± 1	4 of 4

Looking for FBgn0029657. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720