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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029665 through 18771 annotations produced 1 hits



(CG14270):

Annotation Number : CG14270
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029665
Gbrowse : chrX:3378632-3379407 (-) // 100.0 //
Probeset : 1637623_at
Accessions : protein= NP_570063;, nucleotide= NM_130707;
FlyMine data for FBgn0029665.
BDGP gene expression has embryonic in situ data for CG14270: 10 pix of staining in 11 body parts.
VDRC has 2 RNAi stocks for FBgn0029665 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain210 ± 54 of 4 1.00None
Head123 ± 34 of 4 0.60Down
Eye154 ± 94 of 4 0.74Down
Thoracicoabdominal ganglion200 ± 74 of 4 1.00None
Salivary gland147 ± 54 of 4 0.71Down
Crop126 ± 54 of 4 0.60Down
Midgut153 ± 54 of 4 0.70Down
Tubule130 ± 84 of 4 0.60Down
Hindgut101 ± 54 of 4 0.50Down
Heart99 ± 64 of 4 0.48Down
Fat body62 ± 84 of 4 0.30Down
Ovary291 ± 84 of 4 1.40Up
Testis379 ± 124 of 4 1.80Up
Male accessory glands93 ± 34 of 4 0.40Down
Virgin spermatheca123 ± 44 of 4 0.59Down
Mated spermatheca81 ± 44 of 4 0.39Down
Adult carcass94 ± 14 of 4 0.50Down
Larval CNS259 ± 64 of 4 1.24Up
Larval Salivary gland178 ± 104 of 4 0.85None
Larval midgut111 ± 44 of 4 0.53Down
Larval tubule79 ± 14 of 4 0.40Down
Larval hindgut129 ± 44 of 4 0.62Down
Larval fat body73 ± 134 of 4 0.40Down
Larval trachea199 ± 414 of 4 0.96None
Larval carcass132 ± 184 of 4 0.64Down
S2 cells (growing)96 ± 34 of 4 0.46Down
Whole fly208 ± 64 of 4

Looking for FBgn0029665. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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