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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029667 through 18771 annotations produced 1 hits



Growth arrest specific protein 8 (Gas8):

Annotation Number : CG14271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029667
Gbrowse : chrX:3385041-3398884 (-) // 100.0 //
Probeset : 1623694_at
Accessions : protein= NP_570065;, nucleotide= NM_130709;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0029667.
VDRC has 2 RNAi stocks for FBgn0029667 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.10Down
Head6 ± 10 of 4 0.30Down
Eye0 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.20Down
Salivary gland7 ± 30 of 4 0.38Down
Crop3 ± 10 of 4 0.10Down
Midgut3 ± 10 of 4 0.20Down
Tubule3 ± 10 of 4 0.20Down
Hindgut4 ± 10 of 4 0.20Down
Heart3 ± 10 of 4 0.19Down
Fat body11 ± 30 of 4 0.56Down
Ovary3 ± 00 of 4 0.10Down
Testis249 ± 134 of 412.50Up
Male accessory glands6 ± 20 of 4 0.30Down
Virgin spermatheca6 ± 10 of 4 0.30Down
Mated spermatheca8 ± 20 of 4 0.42Down
Adult carcass3 ± 20 of 4 0.20Down
Larval CNS9 ± 14 of 4 0.49Down
Larval Salivary gland8 ± 00 of 4 0.41Down
Larval midgut4 ± 20 of 4 0.23Down
Larval tubule5 ± 20 of 4 0.30Down
Larval hindgut3 ± 00 of 4 0.18Down
Larval fat body29 ± 91 of 4 1.50None
Larval trachea3 ± 10 of 4 0.18Down
Larval carcass4 ± 10 of 4 0.22Down
S2 cells (growing)2 ± 00 of 4 0.12Down
Whole fly20 ± 23 of 4

Looking for FBgn0029667. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime