Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029669 through 18771 annotations produced 1 hits



(CG13021):

Annotation Number : CG13021
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029669
Gbrowse : chrX:3408348-3410093 (+) // 100.0 //
Probeset : 1627010_s_at
Accessions : protein= NP_570067; /// NP_726872; /// NP_726873;, nucleotide= NM_130711; /// NM_166977; /// NM_166978;
FlyMine data for FBgn0029669.
VDRC has 2 RNAi stocks for FBgn0029669 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 01 of 4 0.40Down
Head6 12 of 4 0.50Down
Eye5 11 of 4 0.43Down
Thoracicoabdominal ganglion3 10 of 4 0.30Down
Salivary gland11 40 of 4 0.96None
Crop6 11 of 4 0.50Down
Midgut7 11 of 4 0.60None
Tubule7 12 of 4 0.60Down
Hindgut3 10 of 4 0.30Down
Heart2 00 of 4 0.20Down
Fat body8 13 of 4 0.65None
Ovary2 10 of 4 0.20Down
Testis60 54 of 4 5.00Up
Male accessory glands10 22 of 4 0.90None
Virgin spermatheca5 02 of 4 0.45Down
Mated spermatheca7 11 of 4 0.58Down
Adult carcass4 10 of 4 0.30Down
Larval CNS1 01 of 4 0.16Down
Larval Salivary gland8 00 of 4 0.71None
Larval midgut7 00 of 4 0.58Down
Larval tubule6 11 of 4 0.50Down
Larval hindgut2 00 of 4 0.16Down
Larval fat body12 51 of 4 1.10None
Larval trachea4 20 of 4 0.33Down
Larval carcass5 12 of 4 0.41Down
S2 cells (growing)6 12 of 4 0.53Down
Whole fly12 13 of 4

Looking for FBgn0029669. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime