FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029694 through 18771 annotations produced 1 hits

(CG15375):

Annotation Number : CG15375
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029694
Gbrowse : chrX:3995440-3996588 (+) // 100.0 //
Probeset : 1627904_at
Accessions : protein= NP_572149;, nucleotide= NM_131921;
FlyMine data for FBgn0029694.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.50	None
Head	2 ± 1	0 of 4	0.50	None
Eye	1 ± 0	0 of 4	0.23	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	Down
Salivary gland	8 ± 4	0 of 4	1.48	None
Crop	2 ± 1	0 of 4	0.40	None
Midgut	3 ± 1	0 of 4	0.50	None
Tubule	2 ± 0	0 of 4	0.40	Down
Hindgut	2 ± 1	0 of 4	0.40	None
Heart	1 ± 0	0 of 4	0.21	Down
Fat body	7 ± 4	0 of 4	1.35	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	14 ± 0	2 of 4	2.50	Up
Male accessory glands	6 ± 2	0 of 4	1.10	None
Virgin spermatheca	6 ± 1	0 of 4	1.07	None
Mated spermatheca	1 ± 1	0 of 4	0.34	None
Adult carcass	3 ± 1	0 of 4	0.50	None
Larval CNS	4 ± 3	0 of 4	0.80	None
Larval Salivary gland	2 ± 1	0 of 4	0.46	None
Larval midgut	1 ± 0	0 of 4	0.19	Down
Larval tubule	0 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.24	Down
Larval fat body	3 ± 1	0 of 4	0.60	None
Larval trachea	1 ± 0	0 of 4	0.33	Down
Larval carcass	2 ± 0	0 of 4	0.40	None
S2 cells (growing)	4 ± 1	0 of 4	0.77	None
Whole fly	5 ± 1	0 of 4

Looking for FBgn0029694. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720