Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0029701 through 18771 annotations produced 1 hits


(CG12691):

Annotation Number : CG12691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029701
Gbrowse : chrX:4160192-4160645 (+) // 100.0 //
Probeset : 1638677_at
Accessions : protein= NP_572157;, nucleotide= NM_131929;
FlyMine data for FBgn0029701.
VDRC has 2 RNAi stocks for FBgn0029701 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.10Down
Eye1 ± 00 of 4 0.11Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland1 ± 00 of 4 0.10Down
Crop1 ± 00 of 4 0.10Down
Midgut2 ± 00 of 4 0.20Down
Tubule0 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart0 ± 00 of 4 0.03Down
Fat body0 ± 00 of 4 0.06Down
Ovary0 ± 00 of 4 0.10Down
Testis272 ± 104 of 423.40Up
Male accessory glands2 ± 10 of 4 0.20Down
Virgin spermatheca1 ± 00 of 4 0.11Down
Mated spermatheca1 ± 00 of 4 0.09Down
Adult carcass1 ± 00 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.15Down
Larval Salivary gland3 ± 10 of 4 0.26Down
Larval midgut4 ± 10 of 4 0.35Down
Larval tubule3 ± 10 of 4 0.30Down
Larval hindgut1 ± 00 of 4 0.08Down
Larval fat body13 ± 61 of 4 1.20None
Larval trachea2 ± 10 of 4 0.20Down
Larval carcass0 ± 00 of 4 0.08Down
S2 cells (growing)0 ± 00 of 4 0.05Down
Whole fly11 ± 13 of 4

Looking for FBgn0029701. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime