FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029726 through 18771 annotations produced 1 hits

(CG15471):

Annotation Number : CG15471
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029726
Gbrowse : chrX:4676349-4676997 (-) // 100.0 //
Probeset : 1633128_at
Accessions : protein= NP_001138156; /// NP_572187;, nucleotide= NM_001144684; /// NM_131959;
FlyMine data for FBgn0029726.
VDRC has 2 RNAi stocks for FBgn0029726 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	4 ± 0	0 of 4	0.20	Down
Eye	5 ± 2	1 of 4	0.29	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.20	Down
Salivary gland	12 ± 2	0 of 4	0.68	None
Crop	7 ± 1	0 of 4	0.40	Down
Midgut	2 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	2 ± 0	0 of 4	0.10	Down
Heart	2 ± 0	0 of 4	0.16	Down
Fat body	5 ± 3	0 of 4	0.31	Down
Ovary	1 ± 1	0 of 4	0.10	Down
Testis	370 ± 13	4 of 4	20.00	Up
Male accessory glands	3 ± 1	0 of 4	0.20	Down
Virgin spermatheca	5 ± 0	0 of 4	0.28	Down
Mated spermatheca	2 ± 0	0 of 4	0.12	Down
Adult carcass	2 ± 0	0 of 4	0.10	Down
Larval CNS	2 ± 1	0 of 4	0.15	Down
Larval Salivary gland	6 ± 1	1 of 4	0.34	Down
Larval midgut	9 ± 1	0 of 4	0.49	Down
Larval tubule	4 ± 1	0 of 4	0.20	Down
Larval hindgut	6 ± 0	0 of 4	0.36	Down
Larval fat body	30 ± 16	2 of 4	1.70	None
Larval trachea	3 ± 3	1 of 4	0.20	Down
Larval carcass	4 ± 0	0 of 4	0.23	Down
S2 cells (growing)	2 ± 0	0 of 4	0.11	Down
Whole fly	18 ± 1	3 of 4

Looking for FBgn0029726. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720