Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029730 through 18771 annotations produced 1 hits



(CG12681):

Annotation Number : CG12681
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029730
Gbrowse : chrX:4769713-4771177 (+) // 100.0 //
Probeset : 1633596_at
Accessions : protein= NP_572191;, nucleotide= NM_131963;
FlyMine data for FBgn0029730.
BioGrid reports that CG12681 interacts with CG2713 .
VDRC has 3 RNAi stocks for FBgn0029730 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 14 of 4 0.60Down
Head1 00 of 4 0.00Down
Eye2 00 of 4 0.05Down
Thoracicoabdominal ganglion17 24 of 4 0.40Down
Salivary gland16 50 of 4 0.34Down
Crop1 00 of 4 0.00Down
Midgut2 10 of 4 0.00Down
Tubule1 00 of 4 0.00Down
Hindgut1 00 of 4 0.00Down
Heart1 10 of 4 0.04Down
Fat body7 50 of 4 0.15Down
Ovary1 00 of 4 0.00Down
Testis673 254 of 413.90Up
Male accessory glands2 00 of 4 0.00Down
Virgin spermatheca1 00 of 4 0.03Down
Mated spermatheca3 20 of 4 0.08Down
Adult carcass7 20 of 4 0.10Down
Larval CNS13 33 of 4 0.29Down
Larval Salivary gland3 00 of 4 0.06Down
Larval midgut2 10 of 4 0.05Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut0 00 of 4 0.02Down
Larval fat body88 473 of 4 1.80None
Larval trachea4 41 of 4 0.10Down
Larval carcass1 10 of 4 0.04Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly48 44 of 4

Looking for FBgn0029730. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime