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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029746 through 18771 annotations produced 1 hits



(CG15465):

Annotation Number : CG15465
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029746
Gbrowse : chrX:5069272-5070541 (+) // 100.0 //
Probeset : 1627082_at
Accessions : protein= NP_572206;, nucleotide= NM_131978;
FlyMine data for FBgn0029746.
VDRC has 4 RNAi stocks for FBgn0029746 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain174 ± 84 of 4112.80Up
Head25 ± 32 of 416.10Up
Eye49 ± 72 of 432.16Up
Thoracicoabdominal ganglion136 ± 64 of 487.80Up
Salivary gland5 ± 10 of 4 3.42None
Crop0 ± 00 of 4 0.60None
Midgut1 ± 00 of 4 1.00None
Tubule1 ± 00 of 4 1.20None
Hindgut1 ± 00 of 4 0.60None
Heart1 ± 00 of 4 1.00None
Fat body1 ± 00 of 4 0.90None
Ovary0 ± 00 of 4 0.30Down
Testis0 ± 00 of 4 0.30Down
Male accessory glands1 ± 00 of 4 0.80None
Virgin spermatheca2 ± 10 of 4 1.82None
Mated spermatheca3 ± 10 of 4 1.97None
Adult carcass0 ± 00 of 4 0.40Down
Larval CNS50 ± 74 of 432.76Up
Larval Salivary gland1 ± 00 of 4 0.84None
Larval midgut1 ± 00 of 4 0.76None
Larval tubule1 ± 00 of 4 0.80None
Larval hindgut0 ± 00 of 4 0.40Down
Larval fat body0 ± 00 of 4 0.50Down
Larval trachea10 ± 60 of 4 6.61None
Larval carcass0 ± 00 of 4 0.61None
S2 cells (growing)0 ± 00 of 4 0.37Down
Whole fly1 ± 00 of 4

Looking for FBgn0029746. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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