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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029751 through 18771 annotations produced 1 hits



(CG17764):

Annotation Number : CG17764
Flybase ID : FBgn0029751
Gbrowse : chrX:5200293-5201450 (-) // 100.0 //
Probeset : 1629163_at
Accessions : protein= NP_572211;, nucleotide= NM_131983;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity"
FlyMine data for FBgn0029751.
VDRC has 4 RNAi stocks for FBgn0029751 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.10Down
Head3 10 of 4 0.10Down
Eye4 10 of 4 0.17Down
Thoracicoabdominal ganglion2 10 of 4 0.10Down
Salivary gland8 30 of 4 0.32Down
Crop1 00 of 4 0.10Down
Midgut2 10 of 4 0.10Down
Tubule3 00 of 4 0.10Down
Hindgut2 00 of 4 0.10Down
Heart4 10 of 4 0.16Down
Fat body4 20 of 4 0.16Down
Ovary3 00 of 4 0.10Down
Testis331 124 of 412.30Up
Male accessory glands9 30 of 4 0.40Down
Virgin spermatheca3 00 of 4 0.14Down
Mated spermatheca2 10 of 4 0.09Down
Adult carcass5 10 of 4 0.20Down
Larval CNS3 20 of 4 0.14Down
Larval Salivary gland3 10 of 4 0.11Down
Larval midgut2 00 of 4 0.08Down
Larval tubule3 11 of 4 0.10Down
Larval hindgut4 10 of 4 0.17Down
Larval fat body23 102 of 4 0.90None
Larval trachea5 41 of 4 0.21Down
Larval carcass6 10 of 4 0.23Down
S2 cells (growing)2 10 of 4 0.11Down
Whole fly26 24 of 4

Looking for FBgn0029751. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime