FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029789 through 18771 annotations produced 1 hits

(CG3160):

Annotation Number : CG3160
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029789
Gbrowse : chrX:5579469-5583504 (-) // 100.0 //
Probeset : 1638230_at
Accessions : protein= NP_572245;, nucleotide= NM_132017;
Pathway : 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum
Interpro : 0004518 // nuclease activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferr
FlyMine data for FBgn0029789.
BioGrid reports that CG3160 interacts with CG4380 CG4509 CG3647 .
VDRC has 2 RNAi stocks for FBgn0029789 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 4	4 of 4	1.60	Up
Head	46 ± 6	4 of 4	1.00	None
Eye	56 ± 3	4 of 4	1.17	None
Thoracicoabdominal ganglion	61 ± 3	4 of 4	1.30	None
Salivary gland	59 ± 2	4 of 4	1.23	None
Crop	37 ± 3	4 of 4	0.80	None
Midgut	45 ± 1	4 of 4	0.90	None
Tubule	56 ± 1	4 of 4	1.20	Up
Hindgut	40 ± 1	4 of 4	0.80	None
Heart	36 ± 2	4 of 4	0.77	None
Fat body	30 ± 2	4 of 4	0.63	Down
Ovary	83 ± 2	4 of 4	1.70	Up
Testis	23 ± 2	4 of 4	0.50	Down
Male accessory glands	40 ± 2	4 of 4	0.80	None
Virgin spermatheca	27 ± 1	4 of 4	0.57	Down
Mated spermatheca	26 ± 3	4 of 4	0.56	Down
Adult carcass	37 ± 2	4 of 4	0.80	None
Larval CNS	73 ± 12	4 of 4	1.53	Up
Larval Salivary gland	58 ± 5	4 of 4	1.21	None
Larval midgut	56 ± 2	4 of 4	1.17	None
Larval tubule	61 ± 0	4 of 4	1.30	None
Larval hindgut	44 ± 2	4 of 4	0.93	None
Larval fat body	21 ± 2	1 of 4	0.50	Down
Larval trachea	29 ± 5	4 of 4	0.62	Down
Larval carcass	60 ± 4	4 of 4	1.27	None
S2 cells (growing)	46 ± 2	4 of 4	0.96	None
Whole fly	48 ± 5	4 of 4

Looking for FBgn0029789. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720