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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029814 through 18771 annotations produced 1 hits



(CG15765):

Annotation Number : CG15765
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029814
Gbrowse : chrX:5712596-5733606 (+) // 100.0 //
Probeset : 1638136_at
Accessions : protein= NP_572269;, nucleotide= NM_132041;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0029814.
BDGP gene expression has embryonic in situ data for CG15765: 17 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0029814 available for purchase.
VDRC has 1 RNAi stocks for FBgn0029814 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain339 ± 44 of 4124.50Up
Head39 ± 73 of 414.50Up
Eye12 ± 24 of 4 4.53Up
Thoracicoabdominal ganglion122 ± 84 of 445.10Up
Salivary gland3 ± 00 of 4 1.43None
Crop4 ± 10 of 4 1.50None
Midgut2 ± 00 of 4 0.80None
Tubule2 ± 00 of 4 0.80None
Hindgut4 ± 20 of 4 1.80None
Heart1 ± 00 of 4 0.50None
Fat body5 ± 60 of 4 2.14None
Ovary0 ± 00 of 4 0.30None
Testis0 ± 00 of 4 0.30None
Male accessory glands1 ± 00 of 4 0.50None
Virgin spermatheca1 ± 00 of 4 0.38None
Mated spermatheca1 ± 00 of 4 0.40None
Adult carcass2 ± 00 of 4 0.80None
Larval CNS45 ± 124 of 416.56Up
Larval Salivary gland4 ± 10 of 4 1.47None
Larval midgut4 ± 10 of 4 1.65None
Larval tubule1 ± 00 of 4 0.50None
Larval hindgut8 ± 10 of 4 2.98Up
Larval fat body2 ± 00 of 4 1.00None
Larval trachea4 ± 30 of 4 1.65None
Larval carcass1 ± 00 of 4 0.54None
S2 cells (growing)2 ± 10 of 4 0.80None
Whole fly2 ± 00 of 4

Looking for FBgn0029814. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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