FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0029822 through 18771 annotations produced 2 hits

(CG12236):

Annotation Number : CG12236
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029822
Gbrowse : chrX:5802157-5805832 (+) // 99.71 //
Probeset : 1624189_at
Accessions : protein= NP_572277; /// NP_727050;, nucleotide= NM_132049; /// NM_167054;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from e
FlyMine data for FBgn0029822.
BDGP gene expression has embryonic in situ data for CG12236: 13 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0029822 available for purchase.
VDRC has 1 RNAi stocks for FBgn0029822 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	148 ± 1	4 of 4	2.60	Up
Head	41 ± 4	4 of 4	0.70	Down
Eye	169 ± 13	4 of 4	2.99	Up
Thoracicoabdominal ganglion	83 ± 3	4 of 4	1.50	Up
Salivary gland	39 ± 2	4 of 4	0.69	Down
Crop	26 ± 2	4 of 4	0.50	Down
Midgut	29 ± 2	4 of 4	0.50	Down
Tubule	31 ± 1	4 of 4	0.60	Down
Hindgut	28 ± 2	4 of 4	0.50	Down
Heart	39 ± 3	4 of 4	0.70	Down
Fat body	26 ± 5	4 of 4	0.46	Down
Ovary	204 ± 3	4 of 4	3.60	Up
Testis	8 ± 0	4 of 4	0.10	Down
Male accessory glands	21 ± 2	3 of 4	0.40	Down
Virgin spermatheca	54 ± 2	4 of 4	0.97	None
Mated spermatheca	63 ± 6	4 of 4	1.11	None
Adult carcass	22 ± 2	4 of 4	0.40	Down
Larval CNS	106 ± 8	4 of 4	1.88	Up
Larval Salivary gland	33 ± 2	4 of 4	0.59	Down
Larval midgut	26 ± 1	4 of 4	0.47	Down
Larval tubule	25 ± 1	4 of 4	0.50	Down
Larval hindgut	27 ± 1	4 of 4	0.48	Down
Larval fat body	21 ± 2	4 of 4	0.40	Down
Larval trachea	92 ± 7	4 of 4	1.63	Up
Larval carcass	27 ± 2	4 of 4	0.48	Down
S2 cells (growing)	50 ± 1	4 of 4	0.89	None
Whole fly	56 ± 4	4 of 4

(CG12236):

Annotation Number : CG12236
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029822
Gbrowse : chrX:5802157-5807112 (+) // 100.0 //
Probeset : 1634451_at
Accessions : protein= NP_572277; /// NP_727050;, nucleotide= NM_132049; /// NM_167054;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from e
FlyMine data for FBgn0029822.
BDGP gene expression has embryonic in situ data for CG12236: 13 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0029822 available for purchase.
VDRC has 1 RNAi stocks for FBgn0029822 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 3	4 of 4	0.80	None
Head	27 ± 0	4 of 4	0.80	Down
Eye	67 ± 3	4 of 4	1.95	Up
Thoracicoabdominal ganglion	22 ± 2	4 of 4	0.70	Down
Salivary gland	58 ± 6	4 of 4	1.71	Up
Crop	31 ± 1	4 of 4	0.90	None
Midgut	16 ± 0	2 of 4	0.50	Down
Tubule	14 ± 0	2 of 4	0.40	Down
Hindgut	28 ± 3	4 of 4	0.80	None
Heart	18 ± 0	4 of 4	0.53	Down
Fat body	16 ± 3	4 of 4	0.48	Down
Ovary	75 ± 1	4 of 4	2.20	Up
Testis	10 ± 0	4 of 4	0.30	Down
Male accessory glands	32 ± 4	4 of 4	0.90	None
Virgin spermatheca	25 ± 1	4 of 4	0.75	Down
Mated spermatheca	19 ± 2	4 of 4	0.56	Down
Adult carcass	27 ± 4	2 of 4	0.80	None
Larval CNS	45 ± 5	4 of 4	1.32	Up
Larval Salivary gland	40 ± 2	4 of 4	1.18	None
Larval midgut	15 ± 2	3 of 4	0.45	Down
Larval tubule	14 ± 1	4 of 4	0.40	Down
Larval hindgut	24 ± 1	4 of 4	0.70	Down
Larval fat body	21 ± 1	3 of 4	0.60	Down
Larval trachea	49 ± 7	4 of 4	1.45	Up
Larval carcass	23 ± 0	4 of 4	0.69	Down
S2 cells (growing)	63 ± 0	4 of 4	1.83	Up
Whole fly	34 ± 0	4 of 4

Looking for FBgn0029822. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720