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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029830 through 18771 annotations produced 1 hits



Glutamate receptor binding protein (Grip):

Annotation Number : CG14447
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029830
Gbrowse : chrX:5860313-5880729 (+) // 100.0 //
Probeset : 1639106_at
Accessions : protein= NP_572285;, nucleotide= NM_132057;
Pathway : translocation // inferred from mutant phenotype /// 0016203 // muscle attachment // inferred from genetic interaction /
Interpro : 0005798 // Golgi-associated vesicle // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from
FlyMine data for FBgn0029830.
BioGrid reports that CG14447 interacts with CG14512 .
TRiP has 2 RNAi stocks for FBgn0029830 available for purchase.
VDRC has 3 RNAi stocks for FBgn0029830 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 ± 04 of 4 0.70Down
Head23 ± 24 of 4 0.80None
Eye27 ± 14 of 4 0.91None
Thoracicoabdominal ganglion43 ± 34 of 4 1.40Up
Salivary gland14 ± 40 of 4 0.48Down
Crop57 ± 34 of 4 1.90Up
Midgut38 ± 14 of 4 1.30Up
Tubule10 ± 00 of 4 0.40Down
Hindgut36 ± 24 of 4 1.20None
Heart147 ± 124 of 4 4.95Up
Fat body16 ± 30 of 4 0.55Down
Ovary20 ± 14 of 4 0.70Down
Testis19 ± 14 of 4 0.70Down
Male accessory glands39 ± 44 of 4 1.30None
Virgin spermatheca14 ± 11 of 4 0.48Down
Mated spermatheca15 ± 20 of 4 0.53Down
Adult carcass71 ± 64 of 4 2.40Up
Larval CNS38 ± 34 of 4 1.28Up
Larval Salivary gland6 ± 10 of 4 0.21Down
Larval midgut27 ± 34 of 4 0.94None
Larval tubule9 ± 10 of 4 0.30Down
Larval hindgut25 ± 14 of 4 0.85Down
Larval fat body53 ± 24 of 4 1.80Up
Larval trachea24 ± 14 of 4 0.83Down
Larval carcass38 ± 64 of 4 1.29None
S2 cells (growing)24 ± 13 of 4 0.82Down
Whole fly29 ± 04 of 4

Looking for FBgn0029830. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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