Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029858 through 18771 annotations produced 1 hits



(CG15896):

Annotation Number : CG15896
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029858
Gbrowse : chrX:6185382-6187198 (+) // 100.0 //
Probeset : 1633845_at
Accessions : protein= NP_572309;, nucleotide= NM_132081;
FlyMine data for FBgn0029858.
BDGP gene expression has embryonic in situ data for CG15896: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0029858 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 14 of 4 0.40Down
Head24 14 of 4 0.50Down
Eye26 24 of 4 0.50Down
Thoracicoabdominal ganglion25 24 of 4 0.50Down
Salivary gland34 54 of 4 0.65None
Crop36 24 of 4 0.70None
Midgut23 11 of 4 0.40Down
Tubule27 14 of 4 0.50Down
Hindgut34 24 of 4 0.60Down
Heart25 14 of 4 0.48Down
Fat body26 43 of 4 0.49Down
Ovary96 34 of 4 1.80Up
Testis20 22 of 4 0.40Down
Male accessory glands42 14 of 4 0.80None
Virgin spermatheca21 13 of 4 0.39Down
Mated spermatheca23 14 of 4 0.43Down
Adult carcass28 61 of 4 0.50Down
Larval CNS45 44 of 4 0.85None
Larval Salivary gland49 04 of 4 0.92None
Larval midgut21 42 of 4 0.40Down
Larval tubule29 44 of 4 0.50Down
Larval hindgut35 14 of 4 0.65None
Larval fat body20 42 of 4 0.40Down
Larval trachea47 64 of 4 0.88None
Larval carcass37 24 of 4 0.70None
S2 cells (growing)45 44 of 4 0.85None
Whole fly53 64 of 4

Looking for FBgn0029858. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime