Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029895 through 18771 annotations produced 1 hits



(CG14441):

Annotation Number : CG14441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029895
Gbrowse : chrX:6603752-6611012 (+) // 100.0 //
Probeset : 1630906_at
Accessions : protein= NP_572344;, nucleotide= NM_132116;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0029895.
VDRC has 2 RNAi stocks for FBgn0029895 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 00 of 4 2.10Up
Head7 10 of 4 0.80None
Eye32 34 of 4 3.66Up
Thoracicoabdominal ganglion19 31 of 4 2.20None
Salivary gland12 30 of 4 1.37None
Crop19 12 of 4 2.20Up
Midgut6 00 of 4 0.70None
Tubule4 00 of 4 0.50Down
Hindgut11 10 of 4 1.20None
Heart10 10 of 4 1.13None
Fat body8 10 of 4 0.92None
Ovary7 10 of 4 0.80None
Testis15 10 of 4 1.70Up
Male accessory glands2 00 of 4 0.30Down
Virgin spermatheca2 10 of 4 0.26Down
Mated spermatheca1 00 of 4 0.16Down
Adult carcass3 10 of 4 0.40Down
Larval CNS9 30 of 4 1.08None
Larval Salivary gland3 10 of 4 0.37Down
Larval midgut3 10 of 4 0.40Down
Larval tubule4 10 of 4 0.50Down
Larval hindgut8 00 of 4 0.94None
Larval fat body3 10 of 4 0.40Down
Larval trachea11 30 of 4 1.23None
Larval carcass3 10 of 4 0.35Down
S2 cells (growing)7 20 of 4 0.85None
Whole fly9 10 of 4

Looking for FBgn0029895. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime