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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0029974 through 18771 annotations produced 1 hits



dpr14 (dpr14):

Annotation Number : CG10946
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029974
Gbrowse : chrX:7799673-7801814 (-) // 99.45 //
Probeset : 1633185_at
Accessions : protein= NP_572419;, nucleotide= NM_132191;
FlyMine data for FBgn0029974.
BDGP gene expression has embryonic in situ data for CG10946: 2 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0029974 available for purchase.
VDRC has 5 RNAi stocks for FBgn0029974 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain337 ± 64 of 421.40Up
Head42 ± 34 of 4 2.70Up
Eye32 ± 44 of 4 2.03Up
Thoracicoabdominal ganglion330 ± 214 of 420.90Up
Salivary gland15 ± 40 of 4 1.01None
Crop8 ± 21 of 4 0.50Down
Midgut4 ± 20 of 4 0.30Down
Tubule7 ± 00 of 4 0.50Down
Hindgut6 ± 20 of 4 0.40Down
Heart10 ± 12 of 4 0.66None
Fat body16 ± 30 of 4 1.01None
Ovary4 ± 10 of 4 0.30Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands5 ± 20 of 4 0.30Down
Virgin spermatheca15 ± 13 of 4 0.98None
Mated spermatheca22 ± 62 of 4 1.43None
Adult carcass12 ± 20 of 4 0.80None
Larval CNS62 ± 174 of 4 3.97Up
Larval Salivary gland2 ± 00 of 4 0.14Down
Larval midgut4 ± 20 of 4 0.28Down
Larval tubule8 ± 00 of 4 0.50Down
Larval hindgut6 ± 10 of 4 0.38Down
Larval fat body10 ± 20 of 4 0.60None
Larval trachea7 ± 40 of 4 0.47Down
Larval carcass6 ± 10 of 4 0.44Down
S2 cells (growing)4 ± 10 of 4 0.26Down
Whole fly15 ± 21 of 4

Looking for FBgn0029974. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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