Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030012 through 18771 annotations produced 1 hits



(CG18262):

Annotation Number : CG18262
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030012
Gbrowse : chrX:8047076-8048486 (+) // 100.0 //
Probeset : 1631964_at
Accessions : protein= NP_572453;, nucleotide= NM_132225;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0030012.
Homophila reports that CG18262 is a close match (5e-11) to human gene GLIS3;ZNF515 (NP_689842), a gene associated with Diabetes mellitus, neonatal, with congenital hypothyroidism, 610199 (3).
BioGrid reports that CG18262 interacts with CG32626 .
TRiP has 1 RNAi stocks for FBgn0030012 available for purchase.
VDRC has 1 RNAi stocks for FBgn0030012 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain36 ± 34 of 4 1.10None
Head23 ± 44 of 4 0.70None
Eye21 ± 14 of 4 0.65Down
Thoracicoabdominal ganglion29 ± 44 of 4 0.90None
Salivary gland21 ± 31 of 4 0.63Down
Crop24 ± 04 of 4 0.70Down
Midgut26 ± 14 of 4 0.80None
Tubule15 ± 02 of 4 0.50Down
Hindgut21 ± 04 of 4 0.60Down
Heart14 ± 14 of 4 0.44Down
Fat body25 ± 114 of 4 0.75None
Ovary62 ± 14 of 4 1.80Up
Testis20 ± 14 of 4 0.60Down
Male accessory glands28 ± 34 of 4 0.80None
Virgin spermatheca26 ± 14 of 4 0.78None
Mated spermatheca25 ± 34 of 4 0.75None
Adult carcass30 ± 33 of 4 0.90None
Larval CNS83 ± 24 of 4 2.46Up
Larval Salivary gland17 ± 22 of 4 0.51Down
Larval midgut20 ± 23 of 4 0.59Down
Larval tubule22 ± 14 of 4 0.70Down
Larval hindgut15 ± 14 of 4 0.45Down
Larval fat body20 ± 21 of 4 0.60Down
Larval trachea27 ± 34 of 4 0.80None
Larval carcass22 ± 04 of 4 0.66Down
S2 cells (growing)27 ± 14 of 4 0.81None
Whole fly33 ± 24 of 4

Looking for FBgn0030012. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime