FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030054 through 18771 annotations produced 1 hits

Caf1-180 (Caf1-180):

Annotation Number : CG12109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030054
Gbrowse : chrX:8496393-8500259 (-) // 100.0 //
Probeset : 1635702_a_at
Accessions : protein= NP_572495;, nucleotide= NM_132267;
Pathway : 0005678 // chromatin assembly complex // inferred from sequence or structural similarity /// 0005678 // chromatin assemb
FlyMine data for FBgn0030054.
BioGrid reports that CG12109 interacts with CG13022 .
TRiP has 2 RNAi stocks for FBgn0030054 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030054 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	0.00	Down
Head	16 ± 1	0 of 4	0.10	Down
Eye	7 ± 1	0 of 4	0.05	Down
Thoracicoabdominal ganglion	7 ± 0	0 of 4	0.10	Down
Salivary gland	18 ± 7	0 of 4	0.13	Down
Crop	18 ± 0	0 of 4	0.10	Down
Midgut	9 ± 3	0 of 4	0.10	Down
Tubule	8 ± 1	0 of 4	0.10	Down
Hindgut	20 ± 1	0 of 4	0.10	Down
Heart	6 ± 0	0 of 4	0.04	Down
Fat body	20 ± 5	0 of 4	0.14	Down
Ovary	355 ± 12	4 of 4	2.40	Up
Testis	7 ± 0	0 of 4	0.00	Down
Male accessory glands	39 ± 3	0 of 4	0.30	Down
Virgin spermatheca	11 ± 2	0 of 4	0.07	Down
Mated spermatheca	10 ± 2	0 of 4	0.07	Down
Adult carcass	33 ± 3	0 of 4	0.20	Down
Larval CNS	95 ± 11	4 of 4	0.64	None
Larval Salivary gland	125 ± 8	0 of 4	0.84	None
Larval midgut	30 ± 3	0 of 4	0.20	Down
Larval tubule	27 ± 2	0 of 4	0.20	Down
Larval hindgut	46 ± 2	0 of 4	0.31	Down
Larval fat body	22 ± 6	0 of 4	0.20	Down
Larval trachea	76 ± 11	4 of 4	0.51	None
Larval carcass	63 ± 5	0 of 4	0.42	Down
S2 cells (growing)	180 ± 10	4 of 4	1.20	None
Whole fly	149 ± 23	4 of 4

Looking for FBgn0030054. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720