FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030073 through 18771 annotations produced 3 hits

March 2006 (FlyBase/BDGP 5.3) (chrX:8866939-8868276 (-) // 100.0 //):

Annotation Number : CG10962
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1628935_at
Accessions : protein= EC:1.1.1.-, nucleotide=
Interpro : 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.20	Down
Head	34 ± 1	4 of 4	1.80	Up
Eye	41 ± 28	2 of 4	2.19	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.10	Down
Salivary gland	2 ± 0	0 of 4	0.10	Down
Crop	4 ± 2	0 of 4	0.30	Down
Midgut	58 ± 7	4 of 4	3.00	Up
Tubule	5 ± 1	0 of 4	0.30	Down
Hindgut	16 ± 2	0 of 4	0.90	None
Heart	73 ± 26	4 of 4	3.87	None
Fat body	52 ± 13	4 of 4	2.74	Up
Ovary	23 ± 1	4 of 4	1.20	None
Testis	2 ± 0	0 of 4	0.10	Down
Male accessory glands	2 ± 0	0 of 4	0.10	Down
Virgin spermatheca	70 ± 9	4 of 4	3.68	Up
Mated spermatheca	31 ± 3	4 of 4	1.63	Up
Adult carcass	28 ± 4	1 of 4	1.50	None
Larval CNS	5 ± 3	0 of 4	0.29	Down
Larval Salivary gland	81 ± 4	4 of 4	4.25	Up
Larval midgut	67 ± 9	4 of 4	3.51	Up
Larval tubule	40 ± 7	3 of 4	2.10	None
Larval hindgut	81 ± 19	4 of 4	4.25	None
Larval fat body	2018 ± 336	4 of 4	105.80	Up
Larval trachea	62 ± 18	4 of 4	3.29	Up
Larval carcass	21 ± 3	3 of 4	1.14	None
S2 cells (growing)	1087 ± 34	4 of 4	57.00	Up
Whole fly	19 ± 2	2 of 4

March 2006 (FlyBase/BDGP 5.3) (chrX:8866945-8943020 (-) // 100.0 //):

Annotation Number : CG10962
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1622908_a_at
Accessions : protein= EC:1.1.1.-, nucleotide=
Interpro : 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	1 of 4	0.10	Down
Head	56 ± 7	4 of 4	1.60	None
Eye	73 ± 47	4 of 4	2.09	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.10	Down
Salivary gland	11 ± 4	0 of 4	0.32	Down
Crop	11 ± 1	2 of 4	0.30	Down
Midgut	163 ± 19	4 of 4	4.60	Up
Tubule	17 ± 2	2 of 4	0.50	Down
Hindgut	28 ± 2	4 of 4	0.80	None
Heart	95 ± 35	4 of 4	2.70	None
Fat body	105 ± 26	4 of 4	3.00	Up
Ovary	47 ± 4	4 of 4	1.30	None
Testis	11 ± 0	2 of 4	0.30	Down
Male accessory glands	4 ± 1	0 of 4	0.10	Down
Virgin spermatheca	282 ± 44	4 of 4	8.03	Up
Mated spermatheca	112 ± 6	4 of 4	3.21	Up
Adult carcass	56 ± 7	3 of 4	1.60	None
Larval CNS	8 ± 1	2 of 4	0.24	Down
Larval Salivary gland	89 ± 8	4 of 4	2.55	Up
Larval midgut	248 ± 17	4 of 4	7.05	Up
Larval tubule	53 ± 6	4 of 4	1.50	None
Larval hindgut	164 ± 46	4 of 4	4.68	None
Larval fat body	2949 ± 415	4 of 4	83.90	Up
Larval trachea	105 ± 28	4 of 4	3.00	Up
Larval carcass	31 ± 4	4 of 4	0.91	None
S2 cells (growing)	1499 ± 46	4 of 4	42.64	Up
Whole fly	35 ± 1	4 of 4

March 2006 (FlyBase/BDGP 5.3) (chrX:8866945-8943020 (-) // 100.0 //):

Annotation Number : CG10962
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1639009_at
Accessions : protein= EC:1.1.1.-, nucleotide=
Interpro : 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.20	Down
Head	1 ± 0	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.09	Down
Thoracicoabdominal ganglion	2 ± 0	1 of 4	0.20	Down
Salivary gland	7 ± 1	0 of 4	0.43	Down
Crop	3 ± 0	0 of 4	0.20	Down
Midgut	3 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	18 ± 1	4 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.09	Down
Fat body	7 ± 4	2 of 4	0.47	Down
Ovary	52 ± 0	4 of 4	3.20	Up
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	7 ± 2	1 of 4	0.40	Down
Virgin spermatheca	12 ± 2	4 of 4	0.73	None
Mated spermatheca	17 ± 5	3 of 4	1.06	None
Adult carcass	5 ± 2	0 of 4	0.40	Down
Larval CNS	2 ± 1	0 of 4	0.13	Down
Larval Salivary gland	1 ± 0	0 of 4	0.08	Down
Larval midgut	3 ± 0	0 of 4	0.18	Down
Larval tubule	2 ± 1	0 of 4	0.20	Down
Larval hindgut	4 ± 1	3 of 4	0.28	Down
Larval fat body	2 ± 1	0 of 4	0.20	Down
Larval trachea	2 ± 2	0 of 4	0.15	Down
Larval carcass	1 ± 0	0 of 4	0.08	Down
S2 cells (growing)	1 ± 0	0 of 4	0.07	Down
Whole fly	16 ± 2	4 of 4

Looking for FBgn0030073. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720