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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030091 through 18771 annotations produced 1 hits



(CG7065):

Annotation Number : CG7065
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030091
Gbrowse : chrX:9036584-9041656 (+) // 100.0 //
Probeset : 1639672_at
Accessions : protein= NP_572529;, nucleotide= NM_132301;
FlyMine data for FBgn0030091.
TRiP has 1 RNAi stocks for FBgn0030091 available for purchase.
VDRC has 3 RNAi stocks for FBgn0030091 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain123 ± 54 of 4 3.50Up
Head38 ± 33 of 4 1.10None
Eye48 ± 44 of 4 1.36None
Thoracicoabdominal ganglion70 ± 64 of 4 2.00Up
Salivary gland33 ± 41 of 4 0.94None
Crop33 ± 24 of 4 1.00None
Midgut28 ± 34 of 4 0.80None
Tubule18 ± 02 of 4 0.50Down
Hindgut41 ± 14 of 4 1.20Up
Heart26 ± 23 of 4 0.74Down
Fat body28 ± 74 of 4 0.80None
Ovary56 ± 24 of 4 1.60Up
Testis40 ± 04 of 4 1.10Up
Male accessory glands47 ± 13 of 4 1.30Up
Virgin spermatheca17 ± 12 of 4 0.49Down
Mated spermatheca17 ± 12 of 4 0.48Down
Adult carcass31 ± 71 of 4 0.90None
Larval CNS112 ± 114 of 4 3.19Up
Larval Salivary gland39 ± 34 of 4 1.12None
Larval midgut30 ± 24 of 4 0.87None
Larval tubule29 ± 24 of 4 0.80None
Larval hindgut32 ± 24 of 4 0.92None
Larval fat body23 ± 30 of 4 0.70Down
Larval trachea39 ± 104 of 4 1.12None
Larval carcass31 ± 24 of 4 0.89None
S2 cells (growing)109 ± 24 of 4 3.11Up
Whole fly35 ± 14 of 4

Looking for FBgn0030091. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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